Job Description P0AE01 Confidence 94.90% Date Thu Jan 5 11:22:11 GMT 2012 Rank 22 Aligned Residues 143 % Identity 17% Template c2egwB_ PDB info PDB header:rna methyltransferase Chain: B: PDB Molecule:upf0088 protein aq_165; PDBTitle: crystal structure of rrna methyltransferase with sah ligand Resolution 2.80 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.														.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.											.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.											.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	N	I	R	I	V	L	V	E	T	S	H	T	G	N	M	G	S	V	A	R	A	M	K	T	M	G	L	T	N	L	W	L	V	N	P	.	L	V	K	P	D	S	Q	A	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	A	G	A	S	D	V	I	G	N	A	H	I	V	D	T	L	D	E
Query Conservation																																						.											.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																						.											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	D	I	T	L	Y	Q	S	V	T	V	D	L	K	T	M	D	T	I	V	R	Q	A	T	E	L	G	V	L	T	F	V	P	I	I	S	E	R	S	F	Q	K	E	E	A	I	L	K	K	T	E	K	W	K	R	I	V	I	E	A	M	K	Q	S	R	R	P	I	P	M	E	I	K	K	P	V	R	L	S	D
Template Known Secondary structure		S										S	S	T													T	T										T	T	S																									T	T			S										G	G	G
Template Predicted Secondary structure
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	A	G	C	S	L	V	V	G	T	S	A	R	S	R	T	L	P	W	P	M	L	D	P	R	E	C	G	L	K	S	V	A	E	A	A	N	T	P	V	A	L	V	F	G	R	E	R	V	G	L	T	N	E	E	L	Q	K	C	H	Y	H	V	A	I	A	A	N	P	E	Y	S	S	L	N	L	A	M	A
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.																																		.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.																																		.
Template Sequence		L	I	P	E	S	.	.	.	.	.	.	.	.	.	.	.	E	E	N	I	I	L	D	N	F	Y	E	G	V	K	P	K	D	V	N	L	E	A	K	T	Y	S	V	V	V	G	P	E	G	.	G	F	S	K	R	E	S	Q	I	L	R	E	K	G	F	K	S	V	L	L	E	P	Y	T	L	R	T	E	T	A
Template Known Secondary structure						S	.	.	.	.	.	.	.	.	.	.	.	S							S	S	S			B		G	G	G	S		T	T		S									T	T	.													T	T							S	S	S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.																																		.
Template SS confidence
		151	.	.	.	.												.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		149	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	V	I	A	Y	E	V	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	S	I	V	S	I	L	M
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		219	220	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions