Emaill.a.kelley@imperial.ac.uk
DescriptionP0AD59
DateThu Jan 5 11:20:05 GMT 2012
Unique Job ID15165b84afcaae80

Detailed template information 

#Template Alignment Coverage3D Model Confidence% i.d. Template Information
1d1gpqa_



100.0 100 Fold:Inhibitor of vertebrate lysozyme, Ivy
Superfamily:Inhibitor of vertebrate lysozyme, Ivy
Family:Inhibitor of vertebrate lysozyme, Ivy
2d1uuza_



100.0 26 Fold:Inhibitor of vertebrate lysozyme, Ivy
Superfamily:Inhibitor of vertebrate lysozyme, Ivy
Family:Inhibitor of vertebrate lysozyme, Ivy
3d1fpoa1



49.9 17 Fold:Long alpha-hairpin
Superfamily:Chaperone J-domain
Family:Chaperone J-domain
4c2jkgA_



37.9 23 PDB header:protein-binding
Chain: A: PDB Molecule:profilin;
PDBTitle: plasmodium falciparum profilin
5d1k0ha_



28.2 30 Fold:Phage tail proteins
Superfamily:Phage tail proteins
Family:gpFII-like
6d1h3ia2



18.1 5 Fold:beta-clip
Superfamily:SET domain
Family:Histone lysine methyltransferases
7c3ebqA_



14.6 23 PDB header:hydrolase
Chain: A: PDB Molecule:molecule: pppde1 (permuted papain fold
PDBTitle: crystal structure of human pppde1
8c2xglB_



13.5 25 PDB header:antibiotic
Chain: B: PDB Molecule:colicin-m immunity protein;
PDBTitle: the x-ray structure of the escherichia coli colicin m immunity2 protein demonstrates the presence of a disulphide bridge, which is3 functionally essential
9d1xg8a_



12.8 22 Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:YuzD-like
10c2ww9O_



12.0 29 PDB header:ribosome
Chain: O: PDB Molecule:60s ribosomal protein l39;
PDBTitle: cryo-em structure of the active yeast ssh1 complex bound to the2 yeast 80s ribosome
11c3c5tB_



11.3 30 PDB header:signaling protein/signaling protein
Chain: B: PDB Molecule:exendin-4;
PDBTitle: crystal structure of the ligand-bound glucagon-like peptide-1 receptor2 extracellular domain
12d1ixta_



10.3 46 Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:omega toxin-like
Family:Conotoxin
13c1ixtA_



10.3 46 PDB header:toxin
Chain: A: PDB Molecule:spasmodic protein tx9a-like protein;
PDBTitle: structure of a novel p-superfamily spasmodic conotoxin2 reveals an inhibitory cystine knot motif
14c2l23A_



10.3 25 PDB header:transcription
Chain: A: PDB Molecule:mediator of rna polymerase ii transcription subunit 25;
PDBTitle: nmr structure of the acid (activator interacting domain) of the human2 mediator med25 protein
15c2zkr3_



9.5 21 PDB header:ribosomal protein/rna
Chain: 3: PDB Molecule:60s ribosomal protein l39e;
PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map
16d1vqo21



9.4 60 Fold:Non-globular all-alpha subunits of globular proteins
Superfamily:Ribosomal protein L39e
Family:Ribosomal protein L39e
17c4a1bB_



9.4 29 PDB header:ribosome
Chain: B: PDB Molecule:rpl39;
PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 26s rrna and3 proteins of molecule 3.
18c3if4C_



9.1 44 PDB header:structural genomics, unknown function
Chain: C: PDB Molecule:integron cassette protein hfx_cass5;
PDBTitle: structure from the mobile metagenome of north west arm2 sewage outfall: integron cassette protein hfx_cass5
19c2jofA_



8.9 33 PDB header:de novo protein
Chain: A: PDB Molecule:trp-cage;
PDBTitle: the trp-cage: optimizing the stability of a globular2 miniprotein
20d1t27a_



8.3 16 Fold:TBP-like
Superfamily:Bet v1-like
Family:Phoshatidylinositol transfer protein, PITP
21d1bqka_



not modelled 8.3 26 Fold:Cupredoxin-like
Superfamily:Cupredoxins
Family:Plastocyanin/azurin-like
22c1rijA_



not modelled 8.1 33 PDB header:de novo protein
Chain: A: PDB Molecule:e6apn1 peptide;
PDBTitle: e6-bind trp-cage (e6apn1)
23d1s7ea2



not modelled 8.0 18 Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:CUT domain
24c2guzO_



not modelled 7.3 30 PDB header:chaperone, protein transport
Chain: O: PDB Molecule:mitochondrial import inner membrane translocase
PDBTitle: structure of the tim14-tim16 complex of the mitochondrial2 protein import motor
25c2d9tA_



not modelled 7.2 6 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:tudor domain-containing protein 3;
PDBTitle: solution structure of the tudor domain of tudor domain2 containing protein 3 from mouse
26c2yy8B_



not modelled 7.0 30 PDB header:transferase
Chain: B: PDB Molecule:upf0106 protein ph0461;
PDBTitle: crystal structure of archaeal trna-methylase for position2 56 (atrm56) from pyrococcus horikoshii, complexed with s-3 adenosyl-l-methionine
27c1l2yA_



not modelled 6.6 33 PDB header:de novo protein
Chain: A: PDB Molecule:tc5b;
PDBTitle: nmr structure of trp-cage miniprotein construct tc5b
28d8ruca1



not modelled 6.6 18 Fold:TIM beta/alpha-barrel
Superfamily:RuBisCo, C-terminal domain
Family:RuBisCo, large subunit, C-terminal domain
29d1fm4a_



not modelled 6.5 27 Fold:TBP-like
Superfamily:Bet v1-like
Family:Pathogenesis-related protein 10 (PR10)-like
30c3b4qA_



not modelled 6.4 23 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a conserved protein domain (unknown2 function) from corynebacterium diphtheriae
31d1ugja_



not modelled 6.4 15 Fold:PRC-barrel domain
Superfamily:PRC-barrel domain
Family:RIKEN cDNA 2310057j16 protein (KIAA1543)
32c2v36A_



not modelled 6.3 15 PDB header:transferase
Chain: A: PDB Molecule:gamma-glutamyltranspeptidase large chain;
PDBTitle: crystal structure of gamma-glutamyl transferase from2 bacillus subtilis
33d2a8ea1



not modelled 6.1 14 Fold:YktB/PF0168-like
Superfamily:YktB/PF0168-like
Family:YktB-like
34d2ah2a2



not modelled 6.1 18 Fold:6-bladed beta-propeller
Superfamily:Sialidases
Family:Sialidases (neuraminidases)
35c3a4cA_



not modelled 5.9 26 PDB header:cell cycle, replication
Chain: A: PDB Molecule:dna replication factor cdt1;
PDBTitle: crystal structure of cdt1 c terminal domain
36d1ykwa1



not modelled 5.9 19 Fold:TIM beta/alpha-barrel
Superfamily:RuBisCo, C-terminal domain
Family:RuBisCo, large subunit, C-terminal domain
37c2hw2A_



not modelled 5.9 33 PDB header:transferase
Chain: A: PDB Molecule:rifampin adp-ribosyl transferase;
PDBTitle: crystal structure of rifampin adp-ribosyl transferase in2 complex with rifampin
38d1ooya2



not modelled 5.9 8 Fold:NagB/RpiA/CoA transferase-like
Superfamily:NagB/RpiA/CoA transferase-like
Family:CoA transferase alpha subunit-like
39d1qmra_



not modelled 5.8 27 Fold:TBP-like
Superfamily:Bet v1-like
Family:Pathogenesis-related protein 10 (PR10)-like
40d1fafa_



not modelled 5.7 32 Fold:Long alpha-hairpin
Superfamily:Chaperone J-domain
Family:Chaperone J-domain
41d1e09a_



not modelled 5.4 32 Fold:TBP-like
Superfamily:Bet v1-like
Family:Pathogenesis-related protein 10 (PR10)-like
42c3f9xA_



not modelled 5.3 20 PDB header:transferase
Chain: A: PDB Molecule:histone-lysine n-methyltransferase setd8;
PDBTitle: structural insights into lysine multiple methylation by set2 domain methyltransferases, set8-y334f / h4-lys20me2 /3 adohcy
43c1zc1A_



not modelled 5.3 19 PDB header:protein turnover
Chain: A: PDB Molecule:ubiquitin fusion degradation protein 1;
PDBTitle: ufd1 exhibits the aaa-atpase fold with two distinct2 ubiquitin interaction sites
44d3d85d2



not modelled 5.1 17 Fold:Immunoglobulin-like beta-sandwich
Superfamily:Fibronectin type III
Family:Fibronectin type III
45d1gh6a_



not modelled 5.1 25 Fold:Long alpha-hairpin
Superfamily:Chaperone J-domain
Family:Chaperone J-domain