 |
Job Description | P0AD59 | Confidence | 2.94% | Date | Thu Jan 5 11:20:05 GMT 2012 |
Rank | 89 | Aligned Residues | 66 |
% Identity | 23% | Template | d3ctda1 |
SCOP info | post-AAA+ oligomerization domain-like
| post-AAA+ oligomerization domain-like
| MgsA/YrvN C-terminal domain-like
|
Resolution | 2.50 |
|
 |
  |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | A | I | T | T | V | A | A | L | V | I | A | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
S | A | M | A | Q | D | D | L | T | I | S | S | L | A | K | G | E | T | T | K | A | A | F | N | Q | M | V | Q | G | H | K | L | P | A | W | V | M | K | G | G | T | Y | T | P | A | Q | T | V | T | L | G | D | E | T | Y | Q | V | M |
Query Conservation |   |
  |
|   |   |   |
|
|
|
|   |   |   |   | . | . | . | . | . | . | . | . | . |   |
|   |
|   |   |   |   |
|   |
|   |
|   |   |   |   |   |   |
|
|
|
|   |   |
|
|   |
|   |
|
|
|   |
|
|
|   |
|
|
|
|
|
|   |   |   |
|   |   |   |
|   |   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |
|
|   |   |
|   |
|
|   |   |
|   |   |   |
|
|   |
|
|   |   |   |   |
|
|   |
|   |
|
|
|
|   |
|
|
|
|
|
|   |
|   |
|   |   |
|   |   |   |   |   |   |
|
|   |
|
|
|
|   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Sequence |   |
N | A | I | V | V | V | Q | S | C | C | D | A | F | D | R | V | G | F | P | E | G | L | F | F | L | S | Q | A | S | L | Y | L | A | I | S | P | K | S | N | S | T | K | S | I | F | K | A | M | E | A | I | K | L | V | P | N | H | L | K | N | N | A | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
|
|
| G | G | G |  |  |  |  |  |  |  |  |  |
|
|
|
| G | G | G | S | T | T |
| T | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
313 | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |
  |   |
83 | . | . | . | . | . | . | 90 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | A | C | K | P | H | D | C | G | S | Q | R |
Query Conservation |   |
  |   |
|
|
|
|
|
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|
|   |
|   |   |
|   |
Template Sequence |   |
N | Y | L | N | P | H | N | Y | L | Q | Q | E |
Template Known Secondary structure |   |
T |
|
|
| G | G | G |
|
|
|
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
381 | . | . | . | . | . | . | . | . | 390 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|