Job Description P75828 Confidence 98.83% Date Wed Jan 25 15:21:03 GMT 2012 Rank 67 Aligned Residues 297 % Identity 11% Template c3pihA_ PDB info PDB header:hydrolase/dna Chain: A: PDB Molecule:uvrabc system protein a; PDBTitle: t. maritima uvra in complex with fluorescein-modified dna Resolution 2.90 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	E	R	V	E	I	V	G	F	R	G	I	N	R	L	S	L	M	L	E	Q	N	N	V	L	I	G	E	N	A	W	G	K	S	S	L	L	D	A	L	T	L	L	L	S	P	E	S	D	L	Y	H	F	E	R	D	D	F	W	F	P	P	G	D	I	N	G	R	E	H	H	L	H	I	I	L	T	F	R
Query Conservation
Alig confidence																.
Template Conservation																.
Template Sequence		K	I	K	G	V	R	H	N	N	L	K	N	I	D	.	V	E	I	P	L	G	V	F	V	C	V	T	G	V	S	G	S	G	K	S	S	L	V	M	E	T	L	Y	P	A	L	M	N	L	L	H	K	T	K	L	P	A	G	E	F	D	S	I	E	G	H	E	N	I	D	K	M	I	A	I	D	Q	S	P	I
Template Known Secondary structure								S	T	T			S			.					S	S	S							S	T	T	S	S								T																				S					G	G	G									S
Template Predicted Secondary structure																.
Template SS confidence
		591	.	.	.	.	.	.	.	.	600	.	.	.	.		.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	L	P	G	R	H	R	V	R	R	Y	R	P	L	E	A	C	W	T	P	C	T	D	G	Y	H	R	I	F	Y	R	L	E	G	E	S	A	E	D	G	S	V	M	T	L	R	S	F	L	D	K	D	G	H	P	I	D	V	E	D	I	N	D	Q	A	R	H	L	V	R	L	M	P	V	L	R	L	R	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	R	T	P	R	S	N	P	A	T	Y	T	K	V	F	D	E	I	R	S	L	F	A	M	T	P	A	A	K	A	R	G	Y	N	K	S	R	F	S	F	N	L	K	G	G	R	C	E	A	C	Q	G	Q	G	Y	V	K	I	E	M	L	F	L	P	D	V	Y	V	E	C	D	V	C	K	G	K	R	Y	N	R
Template Known Secondary structure					T	T							S	S										T	T	S						S	S			G	G	G	G		T	T	S	T	T	T	B		T	T	T	T	T	S	S							T	T	S								T	T	T	T	T	S		B		T
Template Predicted Secondary structure
Template SS confidence
		670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	F	M	R	R	I	R	N	G	T	V	P	N	V	P	N	V	E	V	T	A	R	Q	L	D	F	L	A	R	E	L	S	S	H	P	Q	N	L	S	D	G	Q	I	R	Q	G	L	S	A	M	V	Q	L	L	E	H	Y	F	S	E	Q	G	A	G	Q	A	R	Y	R	L	M	R	R	R	A	S	N	E	Q
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	T	L	E	I	T	Y	K	G	K	N	I	S	D	I	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	T	V	D	E	A	L	E	F	F	K	N	I	P	S	I	K	R	T	L	Q	V	L	H
Template Known Secondary structure		T	G	G	G			B	T	T	B							S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	B								T	T	T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.																																								.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.				.	.	.	.
Predicted Secondary structure																																																																											.	.	.
Query SS confidence																																																																											.	.	.
Query Sequence		R	S	W	R	Y	L	D	I	I	N	R	M	I	D	R	P	G	G	R	S	Y	R	V	I	L	L	G	L	F	A	T	L	L	Q	A	K	G	T	L	R	L	D	K	D	A	R	P	L	L	L	I	E	D	P	E	T	R	L	H	P	I	M	L	S	V	A	W	H	L	L	N	L	L	.	.	.	P	L	Q	R
Query Conservation																																																																											.	.	.
Alig confidence																																		.	.	.	.	.	.	.	.	.																																	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.
Template Sequence		D	V	G	L	G	Y	V	K	L	G	Q	P	A	T	T	L	S	G	G	E	A	Q	R	I	K	L	A	S	E	L	R	K	.	.	.	.	.	.	.	.	.	R	D	T	G	R	T	L	Y	I	L	D	E	P	T	V	G	L	H	F	E	D	V	R	K	L	V	E	V	L	H	R	L	V	D	R	G	N	T	V
Template Known Secondary structure			T	T	G	G	G	S	B	T	T			S	T	T																T	S	.	.	.	.	.	.	.	.	.				S	S							S	T	T	T	T																			T	T
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.
Template SS confidence
		791	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.										.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.					.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.
Query SS confidence																									.	.	.	.
Query Sequence		I	A	T	T	N	S	G	E	L	L	S	L	T	P	V	E	H	V	C	R	L	V	R	.	.	.	.	E	S	S	R	V	A	A	W
Query Conservation																									.	.	.	.
Alig confidence														.	.										.	.	.	.
Template Conservation														.	.
Template Sequence		I	V	I	E	H	N	L	D	V	I	K	N	.	.	A	D	H	I	I	D	L	G	P	E	G	G	K	E	G	G	Y	I	V	A	T
Template Known Secondary structure												T	T	.	.		S							S	S	S	G	G	G
Template Predicted Secondary structure														.	.
Template SS confidence
		862	.	.	.	.	.	.	.	870	.	.	.			.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions