Job Description P75828 Confidence 99.16% Date Wed Jan 25 15:21:03 GMT 2012 Rank 27 Aligned Residues 320 % Identity 14% Template c3eukC_ PDB info PDB header:cell cycle Chain: C: PDB Molecule:chromosome partition protein mukb, linker; PDBTitle: crystal structure of muke-mukf(residues 292-443)-mukb(head2 domain)-atpgammas complex, asymmetric dimer Resolution 4.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.			.	.	.	.
Predicted Secondary structure																								.																																																				.	.
Query SS confidence																								.																																																				.	.
Query Sequence		I	L	E	R	V	E	I	V	G	F	R	G	I	N	R	L	S	L	M	L	E	Q	.	N	N	V	L	I	G	E	N	A	W	G	K	S	S	L	L	D	A	L	T	L	L	L	S	P	E	S	D	L	Y	H	F	E	R	D	D	F	W	F	P	P	G	D	I	N	G	R	E	H	H	L	.	.	H	I	I	L
Query Conservation																								.																																																				.	.
Alig confidence																								.																																																				.	.
Template Conservation
Template Sequence		K	F	R	S	L	T	L	I	N	W	N	G	F	F	A	R	T	F	D	F	D	E	L	V	T	T	L	S	G	G	N	G	A	G	K	S	T	T	M	A	G	F	V	T	A	L	I	P	D	L	T	L	L	N	F	R	N	T	T	E	A	G	S	T	S	S	D	K	G	L	Y	G	K	L	K	A	G	V	C	Y
Template Known Secondary structure												T	T							B			S	S	B							T	T	S	S																T	T	T						T	T		S	S							S	T	T	T	T	B		S	S
Template Predicted Secondary structure
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	F	R	E	S	L	P	G	R	H	R	V	R	R	Y	R	P	L	E	A	C	W	T	P	C	T	D	G	Y	H	R	I	F	Y	R	L	E	G	E	S	A	E	D	G	S	V	M	T	L	R	S	F	L	D	K	D	G	H	P	I	D	V	E	D	I	N	D	Q	A	R	H	L	V	R	L	M	P	V	L	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	V	L	E	T	V	N	S	R	A	Q	R	I	I	T	G	V	R	L	Q	Q	I	A	G	R	D	K	K	V	D	I	R	P	F	S	L	Q	N	V	P	M	T	D	S	V	I	S	L	F	T	E	Q	V	A	N	K	A	R	V	L	S	L	N	D	L	K	E	K	F	E	E	T	A	V	T	F	K	P	Y	H
Template Known Secondary structure									T	T															T	T	S															T	T	S		G	G	G	G	S				B	T	T	B															S	S	S							S
Template Predicted Secondary structure
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	R	D	A	R	F	M	R	R	I	R	N	G	T	V	P	N	V	P	N	V	E	V	T	A	R	Q	L	D	F	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	I	T	D	Y	H	S	F	M	F	D	L	G	I	L	P	K	R	L	R	S	S	S	D	R	N	K	F	Y	K	L	I	E	A	S	L	Y	G	G	I	S	S	V	I	T	K	S	L	R	D	Y	L	L	P	E	N	S	G	V	R	Q	A	F	Q	D	M	E	A	A	L	R	E	S	A	E	S	V	A	N	I
Template Known Secondary structure		S											T	T	S		S	S				S																		S			T					T																												T
Template Predicted Secondary structure
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
																																										191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	E	L	S	S	H	P	Q	N	L	S	D	G	Q	I	R	Q	G	L	S	A	M	V	Q	L	L	E	H	Y	F	S	E	Q	G	A	G	Q	A	R	Y
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	R	K	T	I	Q	R	E	Q	N	R	I	L	Q	L	N	Q	G	L	Q	N	I	A	F	G	Q	V	K	G	V	R	L	V	V	N	I	R	D	T	H	S	I	L	L	N	A	L	S	D	Q	H	E	Q	H	K	D	S	F	S	E	A	L	A	M	L	Y	K	R	I	N	P	H	I	Q	T	I	G	E	E	L
Template Known Secondary structure																			T	S	S	S			B	T	T	B																				T	T	T																															T
Template Predicted Secondary structure
Template SS confidence
		1272	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.						.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.		.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.																																											.
Query SS confidence																	.	.	.	.	.																																											.
Query Sequence		R	L	M	R	R	R	A	S	N	E	Q	R	S	W	R	.	.	.	.	.	Y	L	D	I	I	N	R	M	I	D	R	P	G	G	R	S	Y	R	V	I	L	L	G	L	F	A	T	L	L	Q	A	K	G	T	L	R	L	D	K	D	A	R	.	P	L	L	L	I	E	D	P	E	T	R	L	H	P	I	M	L
Query Conservation																	.	.	.	.	.																																											.
Alig confidence																	.	.	.	.	.																																											.									.
Template Conservation																																																																									.
Template Sequence		L	D	Y	R	N	Y	L	D	L	E	V	E	T	L	R	G	A	Y	G	W	M	R	A	E	S	S	A	L	S	T	G	E	A	I	G	T	G	M	S	I	L	L	M	V	V	Q	S	W	E	E	E	S	R	R	M	R	A	K	D	I	L	P	C	R	L	L	F	L	D	Q	A	.	A	R	L	D	A	M	S	I
Template Known Secondary structure		T	S	S	G	G	G										S	S	S	S						G	G	G	S																					T	G	G	G	T	T	T	S		T	T										S	S	G	.	G	G	S		S
Template Predicted Secondary structure																																																																									.
Template SS confidence
		1366	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.		.	.	.	1440	.	.	.	.
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	A	W	H	L	L	N	L	L	P	L	Q	R	I	A	T	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	T	L	F	E	L	C	E	R	L	D	M	Q	L	L	I	A	A
Template Known Secondary structure												T
Template Predicted Secondary structure
Template SS confidence
		1445	.	.	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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