Return to main results Retrieve Phyre Job Id

Job DescriptionP75828
Confidence91.75%DateWed Jan 25 15:21:03 GMT 2012
Rank379Aligned Residues44
% Identity16%Templatec2j289_
PDB info PDB header:ribosomeChain: 9: PDB Molecule:signal recognition particle 54; PDBTitle: model of e. coli srp bound to 70s rncs
Resolution8.0 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30.........40......... 50.........60.....
Predicted Secondary structure 










.















Query SS confidence 



























.















Query Sequence  EQNNVLIGENAWGKSSLLDALTLLLSPE. SDLYHFERDDFWFPPG
Query Conservation     




 








 

   
   .         
      
Alig confidence 



























.















Template Conservation 
 

 


  
 




 



     
 



 

  

 
 

Template Sequence  PAVVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRPAA
Template Known Secondary structure  S

SSSSSSTTTTSSS



B




SSS
S
Template Predicted Secondary structure 
















Template SS confidence 












































   100.........110.........120.........130.........140....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions