Job Description P75828 Confidence 98.84% Date Wed Jan 25 15:21:03 GMT 2012 Rank 65 Aligned Residues 283 % Identity 13% Template c2iw3B_ PDB info PDB header:translation Chain: B: PDB Molecule:elongation factor 3a; PDBTitle: elongation factor 3 in complex with adp Resolution 2.4 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		12	.	.	.	.	.	.	.	20	.	.	.			.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		R	G	I	N	R	L	S	L	M	L	E	Q	.	.	N	N	V	L	I	G	E	N	A	W	G	K	S	S	L	L	D	A	L	T	L	L	L	S	P	E	S	D	L	Y	H	F	E	R	D	D	F	W	F	P	P	G	D	I	N	G	R	E	H	H	L	H	I	I	L	T	F	R	E	S	L	P	G	R	H	R
Query Conservation														.	.
Alig confidence														.	.																																																		.	.	.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.	.	.
Template Sequence		P	Q	I	T	D	I	N	F	Q	C	S	L	S	S	R	I	A	V	I	G	P	N	G	A	G	K	S	T	L	I	N	V	L	T	G	E	L	L	P	T	S	G	E	V	Y	T	H	E	N	C	R	I	A	Y	I	K	Q	H	A	F	A	H	I	.	.	.	.	.	.	.	.	.	E	S	H	L	D	K	T	P
Template Known Secondary structure			S										T	T							S	S													T	T	S	S			S								T	T														G	.	.	.	.	.	.	.	.	.	G	G		T	T	S
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.
Template SS confidence
		681	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.										.	.	.	.	.	.	750	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	R	Y	R	P	L	E	A	C	W	T	P	C	T	D	G	Y	H	R	I	F	Y	R	L	E	G	E	S	A	E	D	G	S	V	M	T	L	R	S	F	L	D	K	D	G	H	P	I	D	V	E	D	I	N	D	Q	A	R	H	L	V	R	L	M	P	V	L	R	L	R	D	A	R	F	M	R	R	I	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	E	Y	I	Q	W	R	F	Q	T	G	E	D	R	E	T	X	D	R	A	N	R	Q	I	N	E	N	D	A	E	A	X	N	K	I	F	K	I	E	G	T	P	R	R	I	A	G	I	H	S	R	R	K	F	K	N	T	Y	E	Y	E	C	S	F	L	L	G	E	N	I	G	X	K	S	E	R	W	V	P	X
Template Known Secondary structure									T	T	T	S	S		T	T	T	T	T	T	T	S					S	S		S	S	S	T	T						T	T															T	T													S	S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		752	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	G	T	V	P	N	V	P	N	V	E	V	T	A	R	Q	L	D	F	L	A	R	E	L	S	S	H	P	Q	N	L	S	D	G	Q	I	R	Q	G	L	S	A	M	V	Q	L	L	E	H	Y	F	S	E	Q	G	A	G	Q	A	R	Y	R	L	M	R	R	R	A	S	N	E	Q	R	S	W	R	Y	L	D	I
Query Conservation
Alig confidence																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		X	S	V	D	N	A	W	I	P	R	G	E	L	V	E	S	H	S	K	X	V	A	E	V	D	X	K	E	A	L	A	S	G	Q	F	R	P	L	T	R	K	E	I	E	E	H	C	S	X	L	G	L	D	P	E	I	V	S	H	S	R	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			G	G	G						G	G	G	T																			T	T																	T	T									S		G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		832	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	R	M	I	D	R	P	G	G	R	S	Y	R	V	I	L	L	G	L	F	A	T	L	L	Q	A	K	G	T	L	R	L	D	K	D	A	R	P	L	L	L	I	E	D	P	E	T	R	L	H	P	I	M	L	S	V	A	W	H	L	L	N	L	L	P	L	Q	R	I	A	T	T	N	S	G	E	L	L	S
Query Conservation
Alig confidence		.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	R	G	L	S	G	G	Q	K	V	K	L	V	L	A	A	G	T	W	.	.	.	.	.	.	.	.	.	.	.	.	Q	R	P	H	L	I	V	L	D	E	P	T	N	Y	L	D	R	D	S	L	G	A	L	S	K	A	L	K	E	F	E	G	G	V	I	I	I	T	H	S	A	E	F	T	K
Template Known Secondary structure		.	.	.	.	.	G	G	S														T	T	.	.	.	.	.	.	.	.	.	.	.	.	T			S							G	G	G	T																	S	S							S						T
Template Predicted Secondary structure		.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
							894	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.													.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.
		330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	P	V	E	H	V	C	R	L
Query Conservation
Alig confidence					.
Template Conservation					.
Template Sequence		N	L	T	.	E	E	V	W	A	V
Template Known Secondary structure		T	T		.
Template Predicted Secondary structure					.
Template SS confidence
		957	.	.		960	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions