Job Description P75828 Confidence 97.41% Date Wed Jan 25 15:21:03 GMT 2012 Rank 81 Aligned Residues 138 % Identity 20% Template c2au3A_ PDB info PDB header:transferase Chain: A: PDB Molecule:dna primase; PDBTitle: crystal structure of the aquifex aeolicus primase (zinc binding and2 rna polymerase domains) Resolution 2.00 Å

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		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410		.	.	.	.	.	.	.	.	.	420	.		.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
Predicted Secondary structure																																			.												.
Query SS confidence																																			.												.
Query Sequence		A	R	C	W	L	L	V	E	G	E	T	E	T	W	V	I	N	E	L	A	R	Q	C	G	H	H	F	D	A	E	G	I	K	.	V	I	E	F	A	Q	S	G	L	K	P	.	L	V	K	F	A	R	R	M	G	I	E	W	H	V	L	V	D	G	D	E	A	G	K	K	Y	A	A	T	V	R	S	L	L	N
Query Conservation																																			.												.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.							.												.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	G	F	A	I	L	V	E	G	Y	F	D	L	L	R	L	.	.	.	.	.	.	.	.	.	.	.	F	S	E	G	I	R	N	V	V	A	P	L	G	T	A	L	T	Q	N	Q	A	N	L	L	S	K	F	T	K	K	V	Y	I	L	Y	D	G	D	D	A	G	R	K	A	M	K	S	A	I	P	L	L	L
Template Known Secondary structure			T						S	S								.	.	.	.	.	.	.	.	.	.	.			T	T			S					S	S	S	S											T	T		S								S	S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.												.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		456	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.											.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.
Query Sequence		N	D	R	E	A	E	R	E	H	L	T	A	L	P	A	L	D	M	E	H	F	M	Y	R	Q	G	F	S	D	V	F	H	R	M	A	Q	I	P	E	.	.	.	.	.	.	.	.	.	.	N	V	P	M	N	L	R	K	I	I	S	K	A	I	H	R	S	S	K	P	D	L	A	I	E	V	A	M	E	A	G
Query Conservation																																									.	.	.	.	.	.	.	.	.	.
Alig confidence			.																																						.	.	.	.	.	.	.	.	.	.
Template Conservation			.
Template Sequence		S	.	A	G	V	E	V	Y	P	V	Y	L	P	E	G	Y	D	P	D	E	F	I	K	E	F	G	K	E	E	L	R	R	L	I	N	S	S	G	E	L	F	E	T	L	I	K	T	A	R	E	N	L	E	E	K	T	R	E	F	R	Y	Y	L	G	F	I	S	D	G	V	R	R	F	A	L	A	S	E	F	H
Template Known Secondary structure			.	T	T										T	T																																	G	G	G														T	T
Template Predicted Secondary structure			.
Template SS confidence
		311		.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
		526	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		390	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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