Return to main results Retrieve Phyre Job Id

Job DescriptionP75828
Confidence93.86%DateWed Jan 25 15:21:03 GMT 2012
Rank163Aligned Residues42
% Identity17%Templatec1qzwC_
PDB info PDB header:signaling protein/rnaChain: C: PDB Molecule:signal recognition 54 kda protein; PDBTitle: crystal structure of the complete core of archaeal srp and2 implications for inter-domain communication
Resolution4.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30.........40.........50.........60...
Predicted Secondary structure 
























Query SS confidence 









































Query Sequence  EQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDFWFP
Query Conservation     




 








 

   
            
    
Alig confidence 









































Template Conservation 
 

 


  






 



      
 

 

 


 
 
Template Sequence  PFIIMLVGVQGSGKTTTAGKLAYFYKKRGYKVGLVAADVYRP
Template Known Secondary structure  S

SSSSSSTTTTTS



B




SSS
Template Predicted Secondary structure 
















Template SS confidence 









































   96...100.........110.........120.........130.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions