Return to main results Retrieve Phyre Job Id

Job DescriptionP75828
Confidence99.53%DateWed Jan 25 15:21:03 GMT 2012
Rank6Aligned Residues76
% Identity29%Templatec1ii8A_
PDB info PDB header:replicationChain: A: PDB Molecule:rad50 abc-atpase; PDBTitle: crystal structure of the p. furiosus rad50 atpase domain
Resolution3.02 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20... ......30.........40.........50.........60.........70......
Predicted Secondary structure 







.































Query SS confidence 






















.




















































Query Sequence  MILERVEIVGFRGINRLSLMLEQ. NNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDFWFPPGDINGREHHLHI
Query Conservation 
 
  
 
 


 
    
 
  . 




 








 

   
            
              
 
Alig confidence 






















.




















































Template Conservation 
 
  
 
 

       
 
   
  
 
 








 

   
                              
Template Sequence  MKLERVTVKNFRSHSDTVVEFKEGINLIIGQNGSGKSSLLDAILVGLYWPLRIKDIKKDEFTKVGARDTYIDLIFEK
Template Known Secondary structure 
SSSS
SS

SS






TTSSTTS

TT

TTS
SS
Template Predicted Secondary structure 




































Template SS confidence 












































































   1........10.........20.........30.........40.........50.........60.........70.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions