Job Description P75828 Confidence 97.93% Date Wed Jan 25 15:21:03 GMT 2012 Rank 75 Aligned Residues 154 % Identity 16% Template c1dd9A_ PDB info PDB header:transferase Chain: A: PDB Molecule:dna primase; PDBTitle: structure of the dnag catalytic core Resolution 1.60 Å

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		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410		.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
Predicted Secondary structure																																			.																																														.
Query SS confidence																																			.																																														.
Query Sequence		A	R	C	W	L	L	V	E	G	E	T	E	T	W	V	I	N	E	L	A	R	Q	C	G	H	H	F	D	A	E	G	I	K	.	V	I	E	F	A	Q	S	G	L	K	P	L	V	K	F	A	R	R	M	G	I	E	W	H	V	L	V	D	G	D	E	A	G	K	K	Y	A	A	T	V	R	S	L	L	N	.
Query Conservation																																			.																																														.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.							.																																														.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	N	R	L	L	V	V	E	G	Y	M	D	V	V	A	L	.	.	.	.	.	.	.	.	.	.	.	A	Q	Y	G	I	N	Y	A	V	A	S	L	G	S	T	T	A	D	H	I	Q	L	L	F	R	A	T	N	N	V	I	C	C	Y	D	G	D	R	A	G	R	D	A	A	W	R	A	L	E	T	A	L	P
Template Known Secondary structure			S						S	S								.	.	.	.	.	.	.	.	.	.	.			T	T																								S								S	S															G	G
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.												.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
			456	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.							.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.
Predicted Secondary structure		.																																																										.	.	.	.	.	.
Query SS confidence		.																																																										.	.	.	.	.	.
Query Sequence		.	N	D	R	E	A	E	R	E	H	L	T	A	L	P	A	L	D	M	E	H	F	M	Y	R	Q	G	F	S	D	V	F	H	R	M	A	Q	I	P	E	N	V	P	M	N	L	R	K	I	I	S	K	A	I	H	R	S	S	.	.	.	.	.	.	K	P	D	L	A	I	E	V	A	M	E	A	G	R	R	G
Query Conservation		.																																																										.	.	.	.	.	.
Alig confidence		.																																			.	.	.	.																				.	.	.	.	.	.
Template Conservation																																					.	.	.	.
Template Sequence		Y	M	T	D	G	R	Q	L	R	F	M	F	L	P	D	G	E	D	P	D	T	L	V	R	K	E	G	K	E	A	F	E	A	R	M	.	.	.	.	E	Q	A	M	P	L	S	A	F	L	F	N	S	L	M	P	Q	V	D	L	S	T	P	D	G	R	A	R	L	S	T	L	A	L	P	L	I	S	Q	V	P
Template Known Secondary structure		G			T	T										T	T																				.	.	.	.	T	T													G	G	G			T	T	S																T	T
Template Predicted Secondary structure																																					.	.	.	.
Template SS confidence
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.					.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
		529	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	S	V	P	T	L	L	K	K	M	F	S	R	V	L	W	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	E	T	L	R	I	Y	L	R	Q	E	L	G	N	K	L	G	I
Template Known Secondary structure																		T
Template Predicted Secondary structure
Template SS confidence
		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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