 |
Job Description | P37005 | Confidence | 62.17% | Date | Thu Jan 5 11:54:16 GMT 2012 |
Rank | 49 | Aligned Residues | 72 |
% Identity | 10% | Template | d1up7a1 |
SCOP info | NAD(P)-binding Rossmann-fold domains
| NAD(P)-binding Rossmann-fold domains
| LDH N-terminal domain-like
|
Resolution | 2.4 |
|
 |
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
. | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | R | I | T | I | I | L | V | A | P | A | R | A | E | N | I | G | A | . |
. |
. |
. |
. |
. |
A | A | R | A | M | K | T | M | G | F | S | D | L | R | I | V | D | S | Q | A | H | L | E | P | A | T | R | W | V | A | H | G | S | G | D | I | I | D | N | I | K | V | F | P | T | L | A | E | S | L | H | D | V | D | F | T |
Query Conservation |   |
|   |
|   |
|
|
|   |   |   |   |   |
|   |
|
|
|
| . | . | . | . | . | . |
|
|
|   |   |   |   |
|
|   |   |   |
|   |
|
|   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |
|
|
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|
| . | . | . | . | . |
|
|
|   |
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |
|
|   |
|
|
|
|
|
Template Sequence |   |
M | R | I | A | V | I | . |
. |
. |
. |
. |
G | G | G | S | S | Y | T | P | E | L | V | K | G | L | L | D | I | S | E | D | V | R | I | D | E | V | I | F | Y | D | I | D | E | E | K | Q | K | I | V | V | D | F | V | K | R | L | V | K | D | R | F | K | V | L | I | S | D | T | F | E | G | A | V | V | D | A | K | Y | V |
Template Known Secondary structure |   |
|  |  |  |  |  | . | . | . | . | . | T | T | T |
| T | T |  |  |  |  |  |  |  |  |  |  |  | T | T | T | S |
|
|
|  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S |  |  |  |  |
| S | S |  |  |  |  |  | T | T |
| S |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | |
|
|
|
|
. | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . |
  |
  |   |
75 | . | . |
Predicted Secondary structure |   |
 |  |  |
Query SS confidence |   |
|
|
|
Query Sequence |   |
V | A | T |
Query Conservation |   |
  |   |   |
Alig confidence |   |
|
|
|
Template Conservation |   |
|
|
|
Template Sequence |   |
I | F | Q |
Template Known Secondary structure |   |
 |  |
|
Template Predicted Secondary structure |   |
 |  |
|
Template SS confidence |   |
|
|
|
  |   |
76 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|