Return to main results Retrieve Phyre Job Id

Job DescriptionP37005
Confidence100.00%DateThu Jan 5 11:54:16 GMT 2012
Rank8Aligned Residues146
% Identity18%Templated1gz0a1
SCOP infoalpha/beta knot alpha/beta knot SpoU-like RNA 2'-O ribose methyltransferase
Resolution2.5

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.. .......50.........60.........70.........80
Predicted Secondary structure 


















.












Query SS confidence 








































.





































Query Sequence  RITIILVAPARAENIGAAARAMKTMGFSDLRIVDSQAHLEP. ATRWVAHGSGDIIDNIKVFPTLAESLHDVDFTVATTAR
Query Conservation   
 


     
 






    

   
 

 
      . 
   
 

   
        
 


         

 
Alig confidence 








































.













.













.........
Template Conservation     


  
  
 


 
 


 


   
 
             
 
 
      .             
.........
Template Sequence  PFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVP. LIRVTNLARTXRXL. . . . . . . . .
Template Known Secondary structure 
S


T
SSSSS



TTS
.S
.........
Template Predicted Secondary structure 






















.

.........
Template SS confidence 















































































   95....100.........110.........120.........130.........140.........150 .........160....
 
   81........90.........100.........110.........120.........130.........140.........150........
Predicted Secondary structure 







































Query SS confidence 













































































Query Sequence  SRAKYHYYATPVELVPLLEEKSSWMSHAALVFGREDSGLTNEELALADVLTGVPMVADYPSLNLGQAVMVYCYQLATL
Query Conservation                             





 
  


 
 
  

  
 

      




 



 



   
Alig confidence  .












































































Template Conservation  .      
                     



 
  


 
 
   
  
 

  
   




 
 

 


  

Template Sequence  . QEENIWIVGTAGEADHTLYQSKXTGRLALVXGAEGEGXRRLTREHCDELISIPXAGSVSSLNVSVATGICLFEAVRQ
Template Known Secondary structure  .TT

TT
SGGGS


SSBTTTBS
T
S


SSSS



Template Predicted Secondary structure  .



































Template SS confidence 













































































   165....170.........180.........190.........200.........210.........220.........230.........240.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions