|   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | |
. | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
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|  |  |  |  |  |  |  |
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Query SS confidence |   |
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Query Sequence |   |
R | I | T | I | I | L | V | A | P | A | R | A | E | N | I | G | A | . |
A | A | R | A | M | K | T | M | G | F | S | D | L | R | I | V | D | S | Q | A | H | L | E | P | A | T | R | W | V | A | H | G | S | G | D | I | I | D | N | I | K | V | F | P | T | L | A | E | S | L | H | D | V | D | F | T | V | A | T | T | A | R |
Query Conservation |   |
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|   |
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|   |   |   |   |   |
|   |
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|   |   |   |   |   |   |   |   |
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|   |
Alig confidence |   |
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Template Conservation |   |
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|   |   | . | . |
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|   |   |   |   |   |   |
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|   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
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Template Sequence |   |
N | I | R | V | A | I | A | G | A | G | . |
. |
G | R | M | G | R | Q | L | I | Q | A | A | L | A | L | E | G | V | Q | L | G | A | A | L | E | R | E | G | S | S | L | L | G | S | D | A | G | E | L | A | G | A | G | K | T | G | V | T | V | Q | S | S | L | D | A | V | K | D | D | F | D | V | F | I | D | F | T | R | P |
Template Known Secondary structure |   |
B |  |  |  |  |  | T | T | T | T | . | . | S |  |  |  |  |  |  |  |  |  |  |  |  | S | T | T |  |  |
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| T | T |
| T | T |
| S |
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| T | T |
| S | S | S | S | S |
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| S |
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|  |  | S |
| S | T | T | T | T | T | S |
| S |  |  |  |  |
| S |
|  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |
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| . | . |
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Template SS confidence |   |
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  |   |
5 | . | . | . | . | 10 | . | . | . | . | |
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. | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
  |
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | |
. | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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|  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |
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Query SS confidence |   |
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Query Sequence |   |
S | R | A | K | Y | H | Y | Y | A | T | P | V | E | L | V | P | L | L | E | E | K | S | S | W | M | S | H | A | A | L | V | F | G | R | E | D | S | G | L | T | N | E | E | L | A | L | A | D | V | L | T | G | V | P | M | V | A | D | Y | P | S | L | N | L | G | Q | A | V | M | V | . |
Y | C | Y | Q | L | A | T | L | I |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
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|   |   |   |   |
Alig confidence |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . |
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| . |
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Template Conservation |   |
  | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
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| . | . |
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|   |   |   |
|   |   |   |   |
|   |   |   |
|   | . | . |   |   |   |
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|   |
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|   |   |   |   |   |   |
|   |   |   |
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Template Sequence |   |
E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | T | L | N | H | L | A | F | C | R | Q | H | G | K | G | M | V | I | G | . |
. |
T | T | G | F | D | E | A | G | K | Q | A | I | R | D | A | A | A | . |
. |
D | I | A | I | V | F | A | A | N | F | S | M | T | F | A | N | G | A | V | R | S | A | L | W | L | S |
Template Known Secondary structure |   |
 | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |
| . | . |
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|  |  |  |  |  |  |  |  |  |  | T | T | . | . | T | S |
|  |  |  |
| S |
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|  |  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  | . | . |
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|  |  |  |  |  |  |  |  |  |  |  |
| . | . |
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|  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
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  |   |
83 | |
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. | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | |
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. | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | |
|
120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . |
  |
  |   |
160 | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
Q | Q | P | A | K |
Query Conservation |   |
  |   |   |   |   |
Alig confidence |   |
|
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|
|
Template Conservation |   |
  |   |   |   |   |
Template Sequence |   |
G | K | E | S | G |
Template Known Secondary structure |   |
T |
|
| S | S |
Template Predicted Secondary structure |   |
 |  |  |  |
|
Template SS confidence |   |
|
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  |   |
256 | . | . | . | 260 |
  |