Job Description P37005 Confidence 95.70% Date Thu Jan 5 11:54:16 GMT 2012 Rank 23 Aligned Residues 141 % Identity 17% Template c3kw2A_ PDB info PDB header:transferase Chain: A: PDB Molecule:probable r-rna methyltransferase; PDBTitle: crystal structure of probable rrna-methyltransferase from2 porphyromonas gingivalis Resolution 2.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.											.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.
Query Sequence		R	I	T	I	I	L	V	A	P	A	R	A	E	N	I	G	A	A	A	R	A	M	K	T	M	G	F	S	D	L	R	I	V	D	S	Q	A	H	L	E	P	A	T	R	.	.	.	.	.	.	.	.	.	.	W	V	A	H	G	S	G	D	I	I	D	N	I	K	V	F	P	T	L	A	E	S	L	H	D	V
Query Conservation																																														.	.	.	.	.	.	.	.	.	.
Alig confidence																																														.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	I	T	I	A	I	A	P	T	K	Q	S	E	R	X	E	W	X	L	E	K	L	V	E	I	G	V	D	E	V	V	F	I	E	S	E	H	S	E	R	R	R	I	K	A	E	R	L	E	R	I	A	I	S	A	X	K	Q	S	L	K	A	S	F	P	V	I	R	V	N	I	P	I	Q	T	V	I	A	D	T
Template Known Secondary structure											S	S																	S								T	T	S			S																		T	T		S	B																	S
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.				.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.
Query SS confidence																									.	.	.
Query Sequence		D	F	T	V	A	T	T	A	R	S	R	A	K	Y	H	Y	Y	A	T	P	V	E	L	.	.	.	V	P	L	L	E	E	K	S	S	W	M	S	H	A	A	L	V	F	G	R	E	D	S	G	L	T	N	E	E	L	A	L	A	D	V	L	T	G	V	P	M	V	A	D	Y	P	S	L	N	L	G	Q	A	V
Query Conservation																									.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.														.	.	.																							.
Template Conservation			.	.	.	.	.	.	.	.	.																																							.
Template Sequence		P	.	.	.	.	.	.	.	.	.	K	A	A	V	R	L	I	A	Y	V	D	E	A	V	R	G	R	G	Y	P	S	D	F	Y	H	V	G	Q	D	V	L	I	L	I	G	P	E	G	.	D	F	S	P	S	E	V	E	S	A	L	L	A	G	F	A	P	V	S	L	G	E	S	R	L	R	T	E	T	A	G
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	T	T	S									T	T							G	G	G	T			T	T	S									T	T	.														T								S	S
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.																																							.
Template SS confidence
		156										.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		149	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	V	Y	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	A	C
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions