Job Description P37005 Confidence 100.00% Date Thu Jan 5 11:54:16 GMT 2012 Rank 16 Aligned Residues 154 % Identity 14% Template c3dcmX_ PDB info PDB header:transferase Chain: X: PDB Molecule:uncharacterized protein tm_1570; PDBTitle: crystal structure of the thermotoga maritima spout family2 rna-methyltransferase protein tm1570 in complex with s-3 adenosyl-l-methionine Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.		10	.	.													.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.													40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.
Predicted Secondary structure										.				.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.				.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	I	T	I	I	L	V	A	.	P	A	R	.	.	.	.	.	.	.	.	.	.	.	.	A	E	N	I	G	A	A	A	R	A	M	K	T	M	G	F	S	D	L	R	I	V	D	S	Q	A	H	.	.	.	.	.	.	.	.	.	.	.	.	L	E	P	A	T	R	W	V	A	H	G	S	G	D	I	I	D
Query Conservation										.				.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.				.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	V	Y	V	A	L	I	H	Y	P	I	K	G	K	D	G	S	I	I	S	T	A	V	T	N	L	D	V	H	D	I	A	R	T	A	R	T	Y	N	L	K	G	Y	Y	I	V	T	N	L	R	A	Q	Q	D	M	V	S	K	M	L	K	F	W	R	E	G	F	G	S	R	Y	N	P	S	R	A	E	S	L	K
Template Known Secondary structure		S								S	S				T	T		S																					T	T		S																								T	S	G	G	G	G	T		S	S	S					T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		N	I	K	V	F	P	T	L	A	E	S	L	H	D	V	D	F	T	V	A	T	T	A	R	S	R	A	K	Y	H	Y	Y	A	T	P	V	E	L	V	P	L	L	E	E	K	S	S	W	M	S	H	A	A	L	V	F	G	R	E	D	S	G	L	T	N	E	E	L	A	L	A	D	V	L	T	.	G	V	P	M
Query Conservation																																																																													.
Alig confidence																																																																													.
Template Conservation
Template Sequence		L	V	K	L	K	S	Y	L	E	D	V	L	E	D	I	E	S	V	E	G	E	R	P	L	I	F	F	T	S	A	K	K	R	E	N	D	I	S	F	E	E	G	R	R	I	I	I	E	T	E	K	P	V	L	I	L	L	G	T	G	W	G	L	P	D	E	I	L	E	I	S	D	Y	V	L	E	P	I	R	A
Template Known Secondary structure		T					S	S													S	S									S	S			S	S		B														S									T	T								T	T		S			B			T	T	T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	D	Y	P	S	L	N	L	G	Q	A	V	M	V	Y	C	Y	Q	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	S	D	F	N	H	L	S	V	R	A	A	A	A	I	I	I	D	R	L
Template Known Secondary structure		T	S	S
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions