Job Description P37005 Confidence 100.00% Date Thu Jan 5 11:54:16 GMT 2012 Rank 7 Aligned Residues 148 % Identity 16% Template c2ha8A_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:tar (hiv-1) rna loop binding protein; PDBTitle: methyltransferase domain of human tar (hiv-1) rna binding2 protein 1 Resolution 1.60 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		R	I	T	I	I	L	V	A	P	A	R	A	E	N	I	G	A	A	A	R	A	M	K	T	M	G	F	S	D	L	R	I	V	D	S	Q	A	H	L	E	P	A	T	R	W	V	A	H	G	S	G	D	I	I	D	N	I	K	V	.	F	P	T	L	A	E	S	L	H	D	V	D	F	T	V	A	T	T	A	R
Query Conservation																																																													.
Alig confidence																																																													.													.	.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.	.
Template Sequence		R	L	I	V	V	A	S	L	I	D	K	P	T	N	L	G	G	L	C	R	T	C	E	V	F	G	A	S	V	L	V	V	G	S	L	Q	C	I	S	D	K	Q	F	Q	H	L	S	V	S	A	E	Q	W	L	P	L	V	E	V	K	P	P	Q	L	I	D	Y	L	Q	Q	K	K	.	.	.	.	.	.	.	.
Template Known Secondary structure								T	T																	T	T		S					S		G	G	G	G	G	S								T	T	G	G	G	T	S							G	G	G										.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	A	K	Y	H	Y	Y	A	T	P	V	E	L	V	P	L	L	E	E	K	S	S	W	M	S	H	A	A	L	V	F	G	R	E	D	S	G	L	T	N	E	E	L	A	L	A	D	V	L	T	G	V	P	M	V	A	D	Y	P	S	L	N	L	G	Q	A	V	M	V	Y	C	Y	Q	L	A	T	L
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	T	E	G	Y	T	I	I	G	V	E	Q	T	A	K	S	L	D	L	T	Q	Y	C	F	P	E	K	S	L	L	L	L	G	N	E	R	E	G	I	P	A	N	L	I	Q	Q	L	D	V	C	V	E	I	P	Q	Q	G	I	I	R	S	L	N	V	H	V	S	G	A	L	L	I	W	E	Y	T	R	Q
Template Known Secondary structure		.		T	T										T	T				G	G	G					S	S							B	T	T	T	B	S						T	T		S									S	S	S	S
Template Predicted Secondary structure		.
Template SS confidence
			98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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