Job Description P37005 Confidence 95.51% Date Thu Jan 5 11:54:16 GMT 2012 Rank 24 Aligned Residues 151 % Identity 14% Template c1vhyB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical protein hi0303; PDBTitle: crystal structure of haemophilus influenzae protein hi0303, pfam2 duf558 Resolution 1.90 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40															.	.	.	.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Query Sequence		M	R	I	T	I	I	L	V	A	P	A	R	A	E	N	I	G	A	A	A	R	A	M	K	T	M	G	F	S	D	L	R	I	V	D	S	Q	A	H	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	P	A	T	R	W	V	A	H	.	.	G	S	G	D	I	I	D	N	I	K	V	F	P	T	L
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Alig confidence													.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Template Conservation													.	.	.
Template Sequence		L	K	I	H	L	G	Q	V	I	S	R	.	.	.	R	X	E	F	T	I	Q	K	S	V	E	L	G	V	N	V	I	T	P	L	W	S	E	R	C	G	V	K	L	D	A	E	R	X	D	K	K	I	Q	Q	W	Q	K	I	A	I	A	A	C	E	Q	C	G	R	N	I	V	P	E	I	R	P	L	X	K	L
Template Known Secondary structure		S											.	.	.												T	T										T	T	S						T	T	T	T																			T		S	S
Template Predicted Secondary structure													.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.				.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	S	L	H	D	V	D	F	T	V	A	T	T	A	R	S	R	A	K	Y	H	Y	Y	A	T	P	V	E	L	V	P	L	L	E	E	K	S	S	W	M	S	H	A	A	L	V	F	G	R	E	D	S	G	L	T	N	E	E	L	A	L	A	D	V	L	T	G	V	P	M	V	A	D	Y	P	S	L	N	L
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.																																				.
Template Conservation									.	.	.	.	.	.	.	.	.	.																																				.
Template Sequence		Q	D	W	C	A	E	N	.	.	.	.	.	.	.	.	.	.	D	G	A	L	K	L	N	L	H	P	R	A	H	Y	S	I	K	T	L	P	T	I	P	A	G	G	V	R	L	L	I	G	S	E	G	.	G	L	S	A	Q	E	I	A	Q	T	E	Q	Q	G	F	T	E	I	L	L	G	K	R	V	L	R	T
Template Known Secondary structure						T			.	.	.	.	.	.	.	.	.	.	S	S								T	T		S	B		T	T	T		S				T	T									T	T	.													T	T								S	S
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.																																				.
Template SS confidence
		157	.	.	160	.	.	.											.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.		.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	A	V	M	V	Y	C	Y	Q	L	A	T	L	I	Q	Q	P	A	K	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	T	A	S	L	A	A	I	S	A	L	Q	I	C	F	G	D	L	G	E	E
Template Known Secondary structure																	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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