Job Description P0AGJ7 Confidence 97.27% Date Wed Jan 25 15:20:34 GMT 2012 Rank 19 Aligned Residues 127 % Identity 14% Template c2yy8B_ PDB info PDB header:transferase Chain: B: PDB Molecule:upf0106 protein ph0461; PDBTitle: crystal structure of archaeal trna-methylase for position2 56 (atrm56) from pyrococcus horikoshii, complexed with s-3 adenosyl-l-methionine Resolution 2.48 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.				80	.	.	.	.	.	.	.	.	.	90					.	.	.
Predicted Secondary structure																																																													.	.	.												.	.	.	.
Query SS confidence																																																													.	.	.												.	.	.	.
Query Sequence		L	C	A	N	T	G	F	R	L	H	I	I	E	P	M	G	F	A	W	D	D	K	R	L	R	R	A	G	L	D	Y	H	E	F	T	A	V	T	R	H	H	D	Y	R	A	F	L	E	A	E	N	P	Q	R	L	F	A	L	T	.	.	.	T	K	G	T	P	A	H	S	A	V	S	.	.	.	.	Y	Q	D
Query Conservation																																																													.	.	.												.	.	.	.
Alig confidence																																																							.						.	.	.												.	.	.	.
Template Conservation																																																							.
Template Sequence		T	A	R	A	F	G	A	D	G	I	I	I	A	S	E	E	D	E	K	V	K	E	S	V	E	D	V	V	K	R	W	G	G	P	F	F	I	E	F	N	R	N	W	R	K	V	M	K	E	F	T	G	V	.	K	V	H	L	T	M	Y	G	L	H	V	D	D	V	I	E	E	L	K	E	K	L	K	K	G	E
Template Known Secondary structure						T	T		S					S	S	S																		S								S											S		.											G	G	G	T										T	T
Template Predicted Secondary structure																																																							.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.					.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.
Query SS confidence																																																							.	.	.	.
Query Sequence		G	D	Y	L	M	F	G	P	E	T	R	G	L	P	A	S	I	L	D	A	L	P	A	E	Q	K	I	R	I	P	M	V	P	D	S	R	S	M	N	L	S	N	A	V	S	V	V	V	Y	E	A	W	R	.	.	.	.	Q	L	G	Y	P	G	A	V	L	R
Query Conservation																																																							.	.	.	.
Alig confidence												.	.									.	.															.	.	.	.														.	.	.	.
Template Conservation												.	.									.	.															.	.	.	.
Template Sequence		D	F	M	I	I	V	G	A	E	K	.	.	V	P	R	E	V	Y	E	L	.	.	A	D	Y	N	V	A	I	G	N	Q	P	H	S	E	.	.	.	.	V	A	A	L	A	V	L	L	D	R	L	L	E	G	K	G	L	K	K	E	F	K	G	A	K	I	K
Template Known Secondary structure									S	S		.	.									.	.		S					S	S	S	S					.	.	.	.													T	T		G	G	G				S	S		S
Template Predicted Secondary structure												.	.									.	.															.	.	.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120			.	.	.	.	.	.	.	.	.	130	.	.	.	.					.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions