Job Description P0AGJ7 Confidence 95.83% Date Wed Jan 25 15:20:34 GMT 2012 Rank 23 Aligned Residues 148 % Identity 14% Template c1vhyB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical protein hi0303; PDBTitle: crystal structure of haemophilus influenzae protein hi0303, pfam2 duf558 Resolution 1.90 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30			.	.	.	.	.	.	.	.	.													40	.	.	.	.	.	.	.	.			.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure																															.	.										.	.	.	.	.	.	.	.	.	.	.	.										.	.
Query SS confidence																															.	.										.	.	.	.	.	.	.	.	.	.	.	.										.	.
Query Sequence		L	N	I	V	L	Y	E	P	E	I	P	P	N	T	G	N	I	I	R	L	C	A	N	T	G	F	R	L	H	.	.	I	I	E	P	M	G	F	A	W	.	.	.	.	.	.	.	.	.	.	.	.	D	D	K	R	L	R	R	A	G	.	.	L	D	Y	H	E	F	T	A	V	T	R	H	H	D	Y	R	A
Query Conservation																															.	.										.	.	.	.	.	.	.	.	.	.	.	.										.	.
Alig confidence											.																				.	.										.	.	.	.	.	.	.	.	.	.	.	.										.	.
Template Conservation											.
Template Sequence		L	K	I	H	L	G	Q	V	I	.	S	R	R	X	E	F	T	I	Q	K	S	V	E	L	G	V	N	V	I	T	P	L	W	S	E	R	C	G	V	K	L	D	A	E	R	X	D	K	K	I	Q	Q	W	Q	K	I	A	I	A	A	C	E	Q	C	G	R	N	I	V	P	E	I	R	P	L	X	K	L	Q	D
Template Known Secondary structure		S									.														T	T										T	T	S						T	T	T	T																			T		S	S
Template Predicted Secondary structure											.
Template SS confidence
		78	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90			.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		F	L	E	A	E	N	P	Q	R	L	F	A	L	T	T	K	G	T	P	A	H	S	A	V	S	.	.	Y	Q	D	G	D	Y	L	M	F	G	P	E	T	R	G	L	P	A	S	I	L	D	A	L	P	A	E	Q	K	I	R	I	P	M	V	P	D	S	R	S	M	N	L	S	N	A	V	S	V	V	V	Y	E
Query Conservation																											.	.
Alig confidence																											.	.														.																									.	.
Template Conservation																																										.																									.	.
Template Sequence		W	C	A	E	N	D	G	A	L	K	L	N	L	H	P	R	A	H	Y	S	I	K	T	L	P	T	I	P	A	G	G	V	R	L	L	I	G	S	E	G	.	G	L	S	A	Q	E	I	A	Q	T	E	Q	Q	G	F	T	E	I	L	L	G	K	R	V	.	.	L	R	T	E	T	A	S	L	A	A	I	S	A
Template Known Secondary structure				T			S	S								T	T		S	B		T	T	T		S				T	T									T	T	.													T	T								S	S		.	.
Template Predicted Secondary structure																																										.																									.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.		.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.			.	.	.	.	.	.	.	230	.	.	.	.	.
		144	.	.	.	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	W	R	Q	L	G	Y	P	G	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Q	I	C	F	G	D	L	G	E
Template Known Secondary structure							S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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