 |
Job Description | P75975 | Confidence | 95.66% | Date | Thu Jan 5 12:16:45 GMT 2012 |
Rank | 58 | Aligned Residues | 54 |
% Identity | 13% | Template | c3fmyA_ |
PDB info |
PDB header:dna binding protein | Chain: A: PDB Molecule:hth-type transcriptional regulator mqsa |
PDBTitle: structure of the c-terminal domain of the e. coli protein2 mqsa (ygit/b3021)
|
Resolution | 1.40 Å |
|
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
W | D | S | L | T | K | E | Q | Q | G | E | L | A | G | K | V | G | S | T | P | G | Y | L | R | L | V | F | N | G | Y | K | K | A | S | F | V | L | A | K | K | L | E | Q | Y | T | S | G | A | I | T | K | S | D | L | R |
Query Conservation |   |
|   |   |
|
|   |   |   |
|   |   |
|
|   |   |   |
|   |
|   |   |   |
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |
|   |
|   |   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |
|
|
|
|   |
|
|
|   |   |
|
|
|
|   |   |
|
|
|   |   |
|   |
|   |   | . |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |
|
|   |
Template Sequence |   |
V | R | K | K | L | S | L | T | Q | K | E | A | S | E | I | F | G | G | G | V | N | A | F | S | R | Y | E | K | G | N | A | . |
P | H | P | S | T | I | K | L | L | R | V | L | D | K | H | P | E | L | L | N | E | I | R |
Template Known Secondary structure |   |
 |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |
| S |
| T | T |  |  |  |  |  |  | T | T |
|
| . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| G | G | G |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
| . |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
77 | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | |
. | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|