Return to main results Retrieve Phyre Job Id

Job DescriptionP75975
Confidence50.64%DateThu Jan 5 12:16:45 GMT 2012
Rank139Aligned Residues24
% Identity21%Templatec2vi6F_
PDB info PDB header:transcriptionChain: F: PDB Molecule:homeobox protein nanog; PDBTitle: crystal structure of the nanog homeodomain
Resolution2.6 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.
Predicted Secondary structure 




Query SS confidence 























Query Sequence  LTKEQQGELAGKVGSTPGYLRLVF
Query Conservation 

   
  

   
 
   
 

 
Alig confidence 























Template Conservation 

   
  

  


    
  

Template Sequence  LSLQQMQELSSILNLSYKQVKTWF
Template Known Secondary structure 

T

Template Predicted Secondary structure 




Template SS confidence 























   26...30.........40.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions