 |
Job Description | P75975 | Confidence | 43.33% | Date | Thu Jan 5 12:16:45 GMT 2012 |
Rank | 165 | Aligned Residues | 31 |
% Identity | 29% | Template | c2da1A_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:alpha-fetoprotein enhancer binding protein; |
PDBTitle: solution structure of the first homeobox domain of at-2 binding transcription factor 1 (atbf1)
|
Resolution | UNK |
|
  |   |
1 | . | . | . | . | . | . | . | |
|
|
. | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
| . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | K | A | Y | W | D | S | L | . |
. |
. |
T | K | E | Q | Q | G | E | L | A | G | K | V | G | S | T | P | G | Y | L | R | L | V | F |
Query Conservation |   |
|   |   |
|
|   |   |
| . | . | . |
|   |   |   |
|   |   |
|
|   |   |   |
|   |
|   |   |   |
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |   |   |   |
|   |   |   |   |
|   |   |
|
|
Template Sequence |   |
L | R | Q | Y | F | D | I | N | N | S | P | S | E | E | Q | I | K | E | M | A | D | K | S | G | L | P | Q | K | V | I | K | H | W | F |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |
| S | S |
|
| T | T |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
22 | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|