Job Description P75975 Confidence 66.33% Date Thu Jan 5 12:16:45 GMT 2012 Rank 100 Aligned Residues 46 % Identity 17% Template c1ic8B_ PDB info PDB header:transcription/dna Chain: B: PDB Molecule:hepatocyte nuclear factor 1-alpha; PDBTitle: hepatocyte nuclear factor 1a bound to dna : mody3 gene2 product Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	A	Y	W	D	S	L	T	K	E	Q	Q	G	E	L	A	G	K	V	G	S	T	P	G	Y	L	R	L	V	F	N	G	Y	K	K	A	S	F	V	L	A	K	K	L	E	Q
Query Conservation
Alig confidence									.
Template Conservation									.
Template Sequence		V	K	S	Y	L	Q	Q	.	H	N	I	P	Q	R	E	V	V	D	T	T	G	L	N	Q	S	H	L	S	Q	H	L	N	K	G	T	P	M	K	T	Q	K	R	A	A	L	Y	T
Template Known Secondary structure									.	T	T																							S
Template Predicted Secondary structure									.
Template SS confidence
		119	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions