 |
Job Description | P10100 | Confidence | 8.31% | Date | Thu Jan 5 11:32:01 GMT 2012 |
Rank | 87 | Aligned Residues | 31 |
% Identity | 35% | Template | d1xjva2 |
SCOP info | OB-fold
| Nucleic acid-binding proteins
| Single strand DNA-binding domain, SSB
|
Resolution | 1.73 |
|
  |   |
92 | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | N | L | T | A | S | G | E | A | F | D | P | T | Q | L | T | A | A | H | P | T | L | P | I | P | S | Y | A | R | I | T | N | L |
Query Conservation |   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|   |
|   |
|   |
|   |
|   |   |   |
| . | . |
|   |
|
|   |
|
|
|
|
|
|   |
|
|
Template Sequence |   |
Q | N | L | T | I | D | I | L | V | Y | D | N | H | V | H | V | A | . |
. |
R | S | L | K | V | G | S | F | L | R | I | Y | S | L |
Template Known Secondary structure |   |
G | G | G | S |  |  |  |  |  |  | T | T |  |  |  |  |  | . | . |  |  |
|
| T | T |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  | . | . |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
214 | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | |
|
. | . | . | . | . | . | . | . | . | 240 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|