Job Description P10100 Confidence 11.19% Date Thu Jan 5 11:32:01 GMT 2012 Rank 59 Aligned Residues 58 % Identity 14% Template c2yujA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:ubiquitin fusion degradation 1-like; PDBTitle: solution structure of human ubiquitin fusion degradation2 protein 1 homolog ufd1 Resolution UNK

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		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	I	P	S	Y	A	R	I	T	N	L	A	N	G	R	M	I	V	V	R	I	N	D	R	G	P	Y	G	N	D	R	V	I	S	L	S	R	A	A	A	D	R	L	N	T	S	N	N	T	K	V	R	I	D	P	I	I	V	A
Query Conservation
Alig confidence																											.	.
Template Conservation																											.	.
Template Sequence		I	T	Y	P	M	L	F	K	L	T	N	K	N	S	D	R	M	T	H	C	G	V	L	E	F	.	.	V	A	D	E	G	I	C	Y	L	P	H	W	M	M	Q	N	L	L	L	E	E	G	G	L	V	Q	V	E	S	V	N	L	Q
Template Known Secondary structure				S	S								T	T	T	T											.	.			B	T	T	B					S							T			T	T
Template Predicted Secondary structure																											.	.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.			.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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