Job Description P10100 Confidence 7.96% Date Thu Jan 5 11:32:01 GMT 2012 Rank 90 Aligned Residues 58 % Identity 14% Template c1zc1A_ PDB info PDB header:protein turnover Chain: A: PDB Molecule:ubiquitin fusion degradation protein 1; PDBTitle: ufd1 exhibits the aaa-atpase fold with two distinct2 ubiquitin interaction sites Resolution UNK

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		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	I	P	S	Y	A	R	I	T	N	L	A	N	G	R	M	I	V	V	R	I	N	D	R	G	P	Y	G	N	D	R	V	I	S	L	S	R	A	A	A	D	R	L	N	T	S	N	N	T	K	V	R	I	D	P	I	I	V	A
Query Conservation
Alig confidence																											.	.
Template Conservation																											.	.
Template Sequence		I	R	Y	P	M	L	F	K	L	T	A	N	E	T	G	R	V	T	H	G	G	V	L	E	F	.	.	I	A	E	E	G	R	V	Y	L	P	Q	W	M	M	E	T	L	G	I	Q	P	G	S	L	L	Q	I	S	S	T	D	V	P
Template Known Secondary structure				S	S								T	T	T												.	.			S	S														T			T	T
Template Predicted Secondary structure																											.	.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.			.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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