Job Description P10151 Confidence 100.00% Date Thu Jan 5 11:32:06 GMT 2012 Rank 2 Aligned Residues 287 % Identity 16% Template c3hhgF_ PDB info PDB header:transcription regulator Chain: F: PDB Molecule:transcriptional regulator, lysr family; PDBTitle: structure of crga, a lysr-type transcriptional regulator from2 neisseria meningitidis. Resolution 3.20 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		M	V	D	L	N	L	L	T	V	F	D	A	V	M	Q	E	Q	N	I	T	R	A	A	H	V	L	G	M	S	Q	P	A	V	S	N	A	V	A	R	L	K	V	M	F	N	D	E	L	F	V	R	Y	G	R	G	I	Q	P	T	A	R	A	F	Q	L	F	G	S	V	R	Q	A	L	Q	L	V	Q	N	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	T	N	S	E	E	L	T	V	F	V	Q	V	V	E	S	G	S	F	S	R	A	A	E	Q	L	A	M	A	N	S	A	V	S	R	I	V	K	R	L	E	E	K	L	G	V	N	L	L	N	R	T	T	R	Q	L	S	L	T	E	E	G	A	Q	Y	F	R	R	A	Q	R	I	L	Q	E	M	A	A	A	E
Template Known Secondary structure																	T	S	S	S					T	T	T	T																		T	S					T	T	S	S	S					T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	S	G	F	E	P	A	S	S	E	R	V	F	H	L	C	V	C	S	P	L	D	S	I	L	T	S	Q	I	Y	N	H	I	E	Q	I	A	P	N	I	H	V	M	F	K	S	S	L	N	Q	N	T	E	H	Q	L	R	Y	Q	E	T	E	F	V	I	S	Y	E	D	F	H	R	P	E	F	T	S	V	P
Query Conservation
Alig confidence																																																								.	.	.
Template Conservation																																																								.	.	.
Template Sequence		T	E	M	L	A	V	H	E	I	P	Q	G	V	L	S	V	D	S	A	M	P	M	V	L	H	L	L	A	P	L	A	A	K	F	N	E	R	Y	P	H	I	R	L	S	L	V	S	S	E	G	Y	I	N	L	.	.	.	I	E	R	K	V	D	I	A	L	R	A	G	E	L	D	D	S	G	L	R	A	R	H
Template Known Secondary structure							T	T	S																		T												S	T	T									S	S	S				.	.	.		T	T	S	S	S							S				S	S
Template Predicted Secondary structure																																																								.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.				.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.																					.
Query SS confidence																			.																					.
Query Sequence		L	F	K	D	E	M	V	L	V	A	S	K	N	H	P	T	I	.	K	G	P	L	L	K	H	D	V	Y	N	E	Q	H	A	A	V	S	L	D	.	R	F	A	S	F	S	Q	P	W	Y	D	T	V	D	K	Q	A	S	I	A	Y	Q	G	M	A	M	M	S	V	L	S	V	V	S	Q	T	H	L	V	A	I
Query Conservation																			.																					.
Alig confidence																			.																					.
Template Conservation
Template Sequence		L	F	D	S	R	F	R	V	I	A	S	P	E	Y	L	A	K	H	G	T	P	Q	S	T	E	E	L	A	G	H	Q	C	L	G	F	T	E	P	G	S	L	N	T	W	A	V	L	D	A	Q	G	N	P	Y	K	I	S	P	H	F	T	A	S	S	G	E	I	L	R	S	L	C	L	S	G	C	G	I	V	C
Template Known Secondary structure																							S	S	G	G	G	G	G	T	S						S	S	T	T	G	G	G							S	S	S	S							S	S			S	S										T	T	S
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.		.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		A	P	R	W	L	A	E	E	F	A	E	S	L	E	L	Q	V	L	.	P	L	P	L	K	Q	N	S	R	T	C	Y	L	S	W	H	E	A	A	G	R	D	K	G	H	Q	W	M	E	E	Q	L	V	S
Query Conservation																				.
Alig confidence																				.
Template Conservation
Template Sequence		L	S	D	F	L	V	D	N	D	I	A	E	G	K	L	I	P	L	L	A	E	Q	T	S	D	K	T	H	P	F	N	A	V	Y	Y	S	D	K	A	V	N	L	R	L	R	V	F	L	D	F	L	V	E
Template Known Secondary structure														T	S	S					T	T	T	B													G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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