Job Description P10151 Confidence 100.00% Date Thu Jan 5 11:32:06 GMT 2012 Rank 4 Aligned Residues 292 % Identity 16% Template c3fzjC_ PDB info PDB header:transcription regulator Chain: C: PDB Molecule:lysr type regulator of tsambcd; PDBTitle: tsar low resolution crystal structure, tetragonal form Resolution 7.10 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		M	V	D	L	N	L	L	T	V	F	D	A	V	M	Q	E	Q	N	I	T	R	A	A	H	V	L	G	M	S	Q	P	A	V	S	N	A	V	A	R	L	K	V	M	F	N	D	E	L	F	V	R	Y	G	R	G	I	Q	P	T	A	R	A	F	Q	L	F	G	S	V	R	Q	A	L	Q	L	V	Q	N	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	L	K	L	Q	T	L	Q	A	L	I	C	I	E	E	V	G	S	L	R	A	A	A	Q	L	L	H	L	S	Q	P	A	L	S	A	A	I	Q	Q	L	E	D	E	L	K	A	P	L	L	V	R	T	K	R	G	V	S	L	T	S	F	G	Q	A	F	M	K	H	A	R	L	I	V	T	E	S	R	R	A	Q
Template Known Secondary structure		.																S									T	T																		T	S		S					S	S	S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170			.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																								.	.
Query SS confidence																																																																								.	.
Query Sequence		P	G	S	G	F	E	P	A	S	S	E	R	V	F	H	L	C	V	C	S	P	L	D	S	I	L	T	S	Q	I	Y	N	H	I	E	Q	I	A	P	N	I	H	V	M	F	K	S	S	L	N	Q	N	T	E	H	Q	L	R	Y	Q	E	T	E	F	V	I	S	Y	E	D	.	.	F	H	R	P	E	F	T	S
Query Conservation																																																																								.	.
Alig confidence																																																																								.	.
Template Conservation
Template Sequence		E	E	I	G	Q	L	R	G	R	W	E	G	H	I	T	F	A	A	S	P	A	I	A	L	A	A	L	P	L	A	L	A	S	F	A	R	E	F	P	D	V	T	V	N	V	R	D	G	M	Y	P	A	V	S	P	Q	L	R	D	G	T	L	D	F	A	L	T	A	A	H	K	H	D	I	D	T	D	L	E	A
Template Known Secondary structure																										T														T	T										T	T	T	T							T	S	S	S								G	G	G	S		T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		V	P	L	F	K	D	E	M	V	L	V	A	S	K	N	H	P	T	I	K	G	P	L	L	K	H	D	V	Y	N	E	Q	H	A	A	V	S	L	D	R	F	A	S	F	S	Q	P	W	Y	D	T	V	D	.	K	Q	A	S	I	A	Y	Q	G	M	A	M	M	S	V	L	S	V	V	S	Q	T	H	L	V	A
Query Conservation																																																							.
Alig confidence																																																							.
Template Conservation
Template Sequence		Q	P	L	Y	V	S	D	V	V	I	V	G	Q	R	Q	H	P	M	A	N	A	T	R	L	A	E	L	Q	E	C	R	W	A	F	S	S	A	P	R	G	P	G	A	I	I	R	N	A	F	A	R	Y	G	L	P	E	P	K	L	G	L	V	C	E	S	F	L	A	L	P	G	V	V	A	H	S	D	L	L	T
Template Known Secondary structure															T	T		T	T	T	T			S	G	G	G	G	T	T	S								T	T	S	T	T										T	T													T	T	T							T	S	S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	P	R	W	L	A	E	E	F	A	E	S	L	E	L	Q	V	L	P	L	P	L	K	Q	N	S	R	T	C	Y	L	S	W	H	E	A	A	G	R	D	K	G	H	Q	W	M	E	E	Q	L	V	S	I	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	M	P	R	T	L	Y	E	R	N	A	F	K	D	Q	L	C	S	I	P	L	Q	D	A	L	P	N	P	T	I	Y	V	L	R	R	H	D	L	P	V	T	P	A	A	A	G	L	I	R	W	I	Q	H	H	A
Template Known Secondary structure										S	S	T	T	G	G	G							S	S													T	T	S
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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