 |
Job Description | P10151 | Confidence | 93.91% | Date | Thu Jan 5 11:32:06 GMT 2012 |
Rank | 159 | Aligned Residues | 53 |
% Identity | 11% | Template | c2krfB_ |
PDB info |
PDB header:transcription | Chain: B: PDB Molecule:transcriptional regulatory protein coma; |
PDBTitle: nmr solution structure of the dna binding domain of competence protein2 a
|
Resolution | UNK |
|
  |   |
15 | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | K | P | Q | L | R | M | V | D | L | N | L | L | T | V | F | D | A | V | M | Q | E | Q | N | I | T | R | A | A | H | V | L | G | M | S | Q | P | A | V | S | N | A | V | A | R | L | K | V | M | F | N | D | E |
Query Conservation |   |
  |   |   |   |
|   |   |
|
|
|   |   |
|   |   |
|   |   |
|   |   |   |   |
|   |
|   |
|
|   |   |
|   |
|
|
|   |
|
|
|   |   |
|   |   |
|
|   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|
|   |   |
|   |   |
|
|   |   |   |
|   |
|   |
|   |
|
|
|
|   |   |
|   |
|
|   |   |
|
|   |   |   |   |   |   |
|   |   |
|
|
|
|   |
Template Sequence |   |
S | Q | K | E | Q | D | V | L | T | P | R | E | C | L | I | L | Q | E | V | E | K | G | F | T | N | Q | E | I | A | D | A | L | H | L | S | K | R | S | I | E | Y | S | L | T | S | I | F | N | K | L | N | V | G |
Template Known Secondary structure |   |
| S |
| S | S | S | S | S |
|  |  |  |  |  |  |  |  |  |  |  | T | T | S |
|  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
| S |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
147 | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|