Job Description P10151 Confidence 28.84% Date Thu Jan 5 11:32:06 GMT 2012 Rank 381 Aligned Residues 54 % Identity 9% Template c2gajA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:dna topoisomerase i; PDBTitle: structure of full length topoisomerase i from thermotoga maritima in2 monoclinic crystal form Resolution 1.95 Å

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		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90										.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.
Query Sequence		S	Q	P	A	V	S	N	A	V	A	R	L	K	V	M	F	N	D	E	L	F	V	R	Y	G	R	G	I	Q	P	T	A	R	A	F	Q	L	F	G	S	V	R	.	.	.	.	.	.	.	.	.	Q	A	L	Q	L	V	Q	N	E	L	P	G	S	G	F
Query Conservation																																												.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.																												.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.
Template Sequence		R	P	S	T	Y	A	S	T	I	K	L	L	.	.	.	L	N	R	G	Y	I	K	K	I	R	G	Y	L	Y	P	T	I	V	G	S	V	V	M	D	Y	L	E	K	K	Y	S	D	V	V	S	V	S	F	T	A	E	M	E	K	D	L	D	E	V	E	Q
Template Known Secondary structure			T	T	T									.	.	.			T	T	S					T	T					B														S	T	T	T	T	S																T
Template Predicted Secondary structure														.	.	.
Template SS confidence
		461	.	.	.	.	.	.	.	.	470	.	.				.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions