Return to main results Retrieve Phyre Job Id

Job DescriptionP10151
Confidence100.00%DateThu Jan 5 11:32:06 GMT 2012
Rank1Aligned Residues294
% Identity27%Templatec2esnC_
PDB info PDB header:structural genomics, unknown functionChain: C: PDB Molecule:probable transcriptional regulator; PDBTitle: the crystal structure of probable transcriptional regulator pa04772 from pseudomonas aeruginosa
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   16...20.........30.........40.........50.........60.........70.........80.........90.....
Predicted Secondary structure 



















Query SS confidence 















































































Query Sequence  KPQLRMVDLNLLTVFDAVMQEQNITRAAHVLGMSQPAVSNAVARLKVMFNDELFVRYGRGIQPTARAFQLFGSVRQALQL
Query Conservation     
  


  
  
  
    
 
 

  
 


 


  
  

  

  

 
   
  

  
  
   
  

  
Alig confidence 















































































Template Conservation         

  
  
  
   

 
 

  
 


 


  
  

  

  

 
   
  

  
  
      

  
Template Sequence  HPLLRRLDLNLLLVFDALYRHRNVGTAASELAISASAFSHALGRLRQGLDDELFLRQGNRMQPTQRAEHLAAAVAAALRA
Template Known Secondary structure 

S
TTS
TS
TTS

TT
Template Predicted Secondary structure 




















Template SS confidence 















































































   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   96...100.........110.. .......120.........130.........140.........150.........160.........170....
Predicted Secondary structure 



.




























Query SS confidence 
















.





























































Query Sequence  VQNELPGSGFEPASSER. VFHLCVCSPLDSILTSQIYNHIEQIAPNIHVMFKSSLNQNTEHQLRYQETEFVISYEDFHRP
Query Conservation                   .   
                                              
           
Alig confidence 
















.


























































.

Template Conservation                       
                                        
     
  
     .  
Template Sequence  LGEGLEEWRPFVPGQSQRTFVFAATDYTAFALLPPLMNRLQHSAPGVRLRLVNAERKLSVEALASGRIDFALGYDRL. PE
Template Known Secondary structure  TTS


TTT





TT


SSS

TTS
S


.
T
Template Predicted Secondary structure 
























.

Template SS confidence 















































































   82.......90.........100.........110.........120.........130.........140.........150........ .160
 
   175....180.........190.........200.........210....... ..220.........230.........240.........250...
Predicted Secondary structure 




















.
















Query SS confidence 










































.



































Query Sequence  EFTSVPLFKDEMVLVASKNHPTIKGPLLKHDVYNEQHAAVSLD. RFASFSQPWYDTVDKQASIAYQGMAMMSVLSVVSQT
Query Conservation        
              
         
     
     .                        
       
  
Alig confidence 










































.



































Template Conservation                                 
     
                                      
  
Template Sequence  GIQAHDWFADRYVVVARRDHPRLAGAPTLEGYLAERHAVVTPWNEDSGVIDRLLARSGLRREVAVQLPTVLAALFLAGST
Template Known Secondary structure  T
TT
TT
SSS

TS
TT

SS
TTT


S
TS
Template Predicted Secondary structure 




































Template SS confidence 















































































   165....170.........180.........190.........200.........210.........220.........230.........240....
 
   254.....260.........270.........280.........290.........300.........310..
Predicted Secondary structure 




















Query SS confidence 


























































Query Sequence  HLVAIAPRWLAEEFAESLELQVLPLPLKQNSRTCYLSWHEAAGRDKGHQWMEEQLVSIC
Query Conservation   

  

            
  
            
         
    
   
    
Alig confidence 









































..














Template Conservation   

  

            
    
          
      ..  
   
   

 
 
Template Sequence  DFLLTAPRHAARALAEAAGLALYPAPFDIPPYVLRLYSHVQH. . RDAHAWMIGQLKGLD
Template Known Secondary structure  S
T

SS



TT
..
TTS

Template Predicted Secondary structure 

















..

Template SS confidence 


























































   245....250.........260.........270.........280...... ...290.........300.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions