Return to main results Retrieve Phyre Job Id

Job DescriptionP07109
Confidence100.00%DateThu Jan 5 11:00:09 GMT 2012
Rank3Aligned Residues239
% Identity30%Templated1g2912
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases ABC transporter ATPase domain-like
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  MSENKLNVIDLHKRYGEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLK
Query Conservation 

   
 
 

         
  

  
  

   
 
 








  
 
      
 
   
              
Alig confidence 

..








































































...
Template Conservation 
 .. 
 
 

         
  

  
  

   
 
 









 
 
      
 
   
  
        ...
Template Sequence  MA. . GVRLVDVWKVFGEVTAVREMSLEVKDGEFMILLGPSGCGKTTTLRMIAGLEEPSRGQIYIGDKLVADPEKGIF. . .
Template Known Secondary structure 
..TTTT

STTSSTSS

STTGGGT...
Template Predicted Secondary structure 

..































...
Template SS confidence 















































































   1. .......10.........20.........30.........40.........50.........60.........70.....
 
   81........90.........100.........110.........120.........130.........140.........150.........160
Predicted Secondary structure 






































Query SS confidence 















































































Query Sequence  VADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERAQGKYPVHLSGGQQQR
Query Conservation               
  
 
   
   


 
 
                      
    
           

 
  

Alig confidence  ......































.























.















Template Conservation  ......       
    
   
    

 
 
     .                
    
  .        

 
  

Template Sequence  . . . . . . VPPKDRDIAMVFQSYALYPHMTVYDNIAFPLK. LRKVPRQEIDQRVREVAELLGLTE. LLNRKPRELSGGQRQR
Template Known Secondary structure  ......

GGGSS
S




TTS
.TT

T
GG.GTT

GGGS
Template Predicted Secondary structure  ......












.






.







Template SS confidence 















































































   76...80.........90.........100....... ..110.........120.........130. ........140.......
 
   161........170.........180.........190.........200. ........210.........220.........230.........
Predicted Secondary structure 












.









Query SS confidence 








































.





































Query Sequence  VSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEE. GKTMVVVTHEMGFARHVSTHVIFLHQGKIEEEGAPEQL
Query Conservation 
 




   
 






  


      
   
  
   .
 


 


         
 
 

  
 

  
    
Alig confidence 








































.





































Template Conservation 
 

 

   
 






  


      
   
  
    
 


  

         
 
  
  
 
   
    
Template Sequence  VALGRAIVRKPQVFLMDEPLSNLDAKLRVRMRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGVLQQVGSPDEV
Template Known Secondary structure  T

S
TTTTS
T
S

STT
Template Predicted Secondary structure 






















Template SS confidence 















































































   148.150.........160.........170.........180.........190.........200.........210.........220.......
 
   240.........250..
Predicted Secondary structure 



Query SS confidence 












Query Sequence  FGNPQSPRLQRFL
Query Conservation               
Alig confidence 












Template Conservation         
    
Template Sequence  YDKPANTFVAGFI
Template Known Secondary structure  S
SS
Template Predicted Secondary structure 




Template SS confidence 












   228.230.........240
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions