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Job DescriptionP07109
Confidence100.00%DateThu Jan 5 11:00:09 GMT 2012
Rank33Aligned Residues236
% Identity27%Templatec3nhaA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:atp-binding cassette sub-family b member 6, mitochondrial; PDBTitle: nucleotide binding domain of human abcb6 (adp mg bound structure)
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  SENKLNVIDLHKRYGEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLKV
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Template Sequence  QKGRIEFENVHFSYADRETLQDVSFTVMPGQTLALVGPSGAGKSTILRLLFRFYDISSGCIRIDGQDISQVT. . . . . . . .
Template Known Secondary structure  SS


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   586...590.........600.........610.........620.........630.........640.........650.......
 
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Query Sequence  ADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGID. . . ERAQGKYPVHLSGGQQ
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Template Sequence  . . . . . QASLRSHIGVVPQDTVLF. NDTIADNIRYGRVTAGNDEVEAAAQAAGIHDAIMAFPEGYRTQVGERGLKLSGGEK
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   159160.........170.........180.........190.........200.........210.........220.........230........
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Query Sequence  QRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSTHVIFLHQGKIEEEGAPEQ
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Template Sequence  QRVAIARTILKAPGIILLDEATSALDTSNERAIQASLAKVCA. NRTTIVVAHRLSTVV. NADQILVIKDGCIVERGRHEA
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   733......740.........750.........760.........770.... .....780......... 790.........800.........810
 
   239240.........250.....
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Query Sequence  LFGNPQSPRLQRFLKGS
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Template Sequence  LLSR. . GGVYADMWQLQ
Template Known Secondary structure  ..TS
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   811... .....820.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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