Job Description P07109 Confidence 94.83% Date Thu Jan 5 11:00:09 GMT 2012 Rank 443 Aligned Residues 125 % Identity 18% Template c3io5B_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:recombination and repair protein; PDBTitle: crystal structure of a dimeric form of the uvsx recombinase core2 domain from enterobacteria phage t4 Resolution 2.40 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	G	D	V	I	S	I	I	G	S	S	G	S	G	K	S	T	F	L	R	C	I	N	F	L	E	K	P	S	E	G	S	I	V	V	N	G	Q	T	I	N	L	V	R	D	K	D	G	Q	L	K	V	A	D	K	N	Q	L	R	L	L	R	T	R	L	T	M	V	F	Q	H	F	N	L	W	S	H	M	T
Query Conservation
Alig confidence					.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	S	G	.	L	L	I	L	A	G	P	S	K	S	F	K	S	N	F	G	L	T	M	V	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	Y	M	R	Q	Y	P	D	A	V	C	L	F	Y	D	S	E	F	G	I	T	P	A
Template Known Secondary structure			S		.								S	S	S	S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T								S	S
Template Predicted Secondary structure					.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		52	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.																																	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	E	N	V	M	E	A	P	I	Q	V	L	G	L	S	K	Q	E	A	R	E	R	A	V	K	Y	L	A	K	V	G	I	D	E	R	A	Q	G	K	Y	P	V	H	L	S	G	G	Q	Q	Q	R	V	S	I	A	R	A	L	A	M	E	P	E	V	L	L	F	D	E	P	T	S	A	L	D	P	E	L	V
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	L	R	S	M	G	V	D	P	E	R	V	I	H	T	P	V	Q	S	L	E	Q	L	R	I	D	M	V	N	Q	L	D	A	I	E	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	K	V	V	V	F	I	D	S	L	G	N	L	A	S	K	T	R	A
Template Known Secondary structure						T	T			G	G	G							S	B														T			T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T										S	T	T		B
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.																									.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		189	190	.	.	.	.	.	.	.	.	.					200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure													.	.	.	.
Query SS confidence													.	.	.	.
Query Sequence		G	E	V	L	R	I	M	Q	Q	L	A	.	.	.	.	E	E	G	K	T	M	V	V	V	T	H
Query Conservation													.	.	.	.
Alig confidence													.	.	.	.
Template Conservation
Template Sequence		K	T	M	K	S	L	F	R	I	V	T	P	Y	F	S	T	K	N	I	P	C	I	A	I	N	H
Template Known Secondary structure																		T	T
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions