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Job DescriptionP07109
Confidence97.80%DateThu Jan 5 11:00:09 GMT 2012
Rank101Aligned Residues161
% Identity11%Templatec3bh0A_
PDB info PDB header:replicationChain: A: PDB Molecule:dnab-like replicative helicase; PDBTitle: atpase domain of g40p
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30.........40.........50.........60.........70.........80.........90.........100.......
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Query Sequence  ANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHM
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Template Sequence  YKRRNFVLIAARPSMGKTAFALKQAKNMSDNDDVVNLHS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LEM
Template Known Secondary structure  B
TT


TTSSTTT
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   192.......200.........210.........220.........230 ...
 
   108.110.........120......... 130.........140.........150.........160......... 170.....
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Query Sequence  TVLENVMEAPIQVLGLSKQEAR. . . . . . . . . . . ERAVKYLAKVGIDERAQGKYPVHLSGGQQQRVSIARALAM. EPEVLL
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Template Conservation         
            
                            
          
   
             

Template Sequence  GKKENIKRLIVTAGSINAQKIKAARRDFASEDWGKLSMAIGEISNSNINIFDKAGQSVNYIWSKTRQTKRKNPGKRVIVM
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TT

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   234.....240.........250.........260.........270.........280.........290.........300.........310...
 
   176.. .180.........190.........200. ........210... ......220......
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Query Sequence  FDE. . . . . . . PTSALDPELVGEVLRIMQQLAEE. GKTMVVVTHEMG. . . . . . . . . . . . . . . . . . . FARHVSTHVIFLH
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Template Sequence  IDYLQLLEPAKANDSRTNQISQISRDLKKMARELDVVVIALSQLSRQVEQRQDKRPMLSDLRESGQLEQDADIIEFLY
Template Known Secondary structure 
GGGSB
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   314.....320.........330.........340.........350.........360.........370.........380.........390.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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