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Job DescriptionP07109
Confidence100.00%DateThu Jan 5 11:00:09 GMT 2012
Rank15Aligned Residues241
% Identity29%Templatec2d62A_
PDB info PDB header:sugar binding proteinChain: A: PDB Molecule:multiple sugar-binding transport atp-binding PDBTitle: crystal structure of multiple sugar binding transport atp-2 binding protein
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MSENKLNVIDLHKRYGEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLK
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Template Sequence  IGXAEVKLINIWKRFGDVTAVKDLSLEIKDGEFLVLLGPSGCGKTTTLRXIAGLEEPTRGQIYIEDNLVADPEKGVF. . .
Template Known Secondary structure 
S

STT
TT

STTSSTSS

STTGGGT...
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   2.......10.........20.........30.........40.........50.........60.........70........
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  VADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERAQGKYPVHLSGGQQQR
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Template Sequence  . . . . . . VPPKERDVAXVFQSYALYPHXTVYDNIAFPLK. LRKVPKQEIDKRVREVAEXLGLTE. LLNRKPRELSGGQRQR
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T


S



TTS
.TTT

TT
GG.GTT

GGGS
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   7980.........90.........100.........110 .........120.........130.... .....140.........150
 
   161........170.........180.........190.........200. ........210.........220.........230.........
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Query Sequence  VSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEE. GKTMVVVTHEMGFARHVSTHVIFLHQGKIEEEGAPEQL
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Template Sequence  VALGRAIIRRPKVFLXDEPLSNLDAKLRVKXRAELKKLQRQLGVTTIYVTHDQVEAXTXGDRIAVXNKGELQQVGTPDEV
Template Known Secondary structure  SS

SSTTTT

T
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   151........160.........170.........180.........190.........200.........210.........220.........230
 
   240.........250..
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Query Sequence  FGNPQSPRLQRFL
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Template Sequence  YYKPVNTFVAGFI
Template Known Secondary structure  S
SBS
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   231........240...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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