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Job DescriptionP07109
Confidence98.53%DateThu Jan 5 11:00:09 GMT 2012
Rank91Aligned Residues167
% Identity9%Templatec1wxqA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:gtp-binding protein; PDBTitle: crystal structure of gtp binding protein from pyrococcus horikoshii2 ot3
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   34.....40.........50.........60.........70.........80.........90.........100.........110...
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Query Sequence  ISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENV
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Template Sequence  IGVVGKPNVGKSTFFSAATLA. . . . . . NVGVTYAITDHPCKELGCSPNPQNYEYRNGLALIPVKXVDVAFLDDLRXASAL
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S
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S


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TT




SSTT
S
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   3......10.........20... ......30.........40.........50.........60.........70......
 
   114.....120...... ...130.........140.........150.........160.......
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Query Sequence  MEAPIQVLGLSKQ. . . . . . . . . . . . . . . . . . . . . . . . . . EARERAVKYLAKVGIDERAQGKYPVHLSGGQQQRVSIARAL
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Template Sequence  IHVVDATGKTDPEGQPTDYHDPVEDIEFLEREIDYWIYGILSKGWDKFAKRIKLQKIKLESAIAEHLSGIGVNENDVWEA
Template Known Secondary structure  TT

B
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B
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TGGGT

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   106...110.........120.........130.........140.........150.........160.........170.........180.....
 
   168.170.........180.........190.........200.........210.
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Query Sequence  AMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHE
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Template Sequence  XHKLNLPEDPTKWSQDDLLAFAS. . . . . EIRRVNKPXVIAANKA
Template Known Secondary structure  TT

S
GGG

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G
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   186...190.........200........ .210.........220....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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