Job Description P00944 Confidence 100.00% Date Thu Jan 5 10:57:16 GMT 2012 Rank 4 Aligned Residues 377 % Identity 26% Template d1xlma_ SCOP info TIM beta/alpha-barrel Xylose isomerase-like Xylose isomerase Resolution 2.40

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	K	R	M	E	E	H	L	R	F	A	A	C	Y	W	H	T	F	C	W	N	G	A	D	M	F	G	V	G	A	F	N	R	P	W	Q	Q	P	G	E	A	L	A	L	A	K	R	K	A	D	V	A	F	E	F	F	H	K	L	H	V	P	F	Y	C	F	H	D	V	D	V	S	P	E	G	A	S	L	K
Query Conservation
Alig confidence									.	.								.															.	.													.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.								.															.	.													.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	Q	P	T	P	A	D	.	.	H	F	T	F	G	L	W	.	T	V	G	W	T	G	A	D	P	F	G	V	A	T	.	.	R	K	N	L	D	P	V	E	A	V	H	K	.	.	.	.	.	.	.	.	.	.	.	L	A	E	L	G	A	Y	G	I	T	F	H	D	N	D	L	I	P	F	D	A	T	E	A
Template Known Secondary structure						G	G	G	.	.								.			T					B	T	T	B				.	.	S												.	.	.	.	.	.	.	.	.	.	.					T												S		T	T
Template Predicted Secondary structure									.	.								.															.	.													.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.			.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.	.	40	.												.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Y	I	N	N	F	A	Q	M	V	D	V	L	A	G	K	Q	E	E	S	G	V	K	L	L	W	G	T	A	N	C	F	T	N	P	R	Y	G	A	G	A	A	T	N	P	D	P	E	V	F	S	W	A	A	T	Q	V	V	T	A	M	E	A	T	H	K	L	G	G	E	N	Y	V	L	W	G	G	R	E	G
Query Conservation
Alig confidence																.	.	.	.
Template Conservation																.	.	.	.
Template Sequence		E	R	E	K	I	L	G	D	F	N	Q	A	L	K	.	.	.	.	D	T	G	L	K	V	P	M	V	T	T	N	L	F	S	H	P	V	F	K	D	G	G	F	T	S	N	D	R	S	I	R	R	F	A	L	A	K	V	L	H	N	I	D	L	A	A	E	M	G	A	E	T	F	V	M	W	G	G	R	E	G
Template Known Secondary structure																.	.	.	.			T											S	S	S	G	G	G	T	T		S	T	T		S	S																						T		S							S	S	S
Template Predicted Secondary structure																.	.	.	.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.					80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	E	T	L	L	N	T	D	L	R	Q	E	R	E	Q	L	G	R	F	M	Q	M	V	V	E	H	K	H	K	I	G	F	Q	G	T	L	L	I	E	P	K	P	Q	E	P	T	K	H	Q	Y	D	Y	D	A	A	T	V	Y	G	F	L	K	Q	F	G	L	E	K	E	I	K	L	N	I	E	A	N	H	A	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	E	Y	D	G	S	K	D	L	A	A	A	L	D	R	M	R	E	G	V	D	T	A	A	G	Y	I	K	D	K	G	Y	N	L	R	I	A	L	E	P	K	P	N	E	P	R	G	D	I	F	L	P	T	V	G	H	G	L	A	F	I	E	Q	L	E	H	G	D	I	V	G	L	N	P	E	T	G	H	E	Q
Template Known Secondary structure			S	S	G	G	G																									T		S									S		S	S	S	S			S	S		S									T	T		T	T	G	G	G						B
Template Predicted Secondary structure
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.							.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.
Query Sequence		L	A	G	H	S	F	H	H	E	I	A	T	A	I	A	L	G	L	F	G	S	V	D	A	N	R	G	D	A	Q	L	G	W	D	T	D	Q	F	P	N	S	V	E	E	N	A	L	V	M	Y	E	I	L	K	A	G	G	F	T	T	G	G	.	.	.	.	.	.	L	N	F	D	A	K	V	R	R	Q	S	T
Query Conservation																																																																.	.	.	.	.	.
Alig confidence																											.																																					.	.	.	.	.	.										.	.
Template Conservation																											.																																																				.	.
Template Sequence		M	A	G	L	N	F	T	H	G	I	A	Q	A	L	W	A	E	K	L	F	H	I	D	L	N	.	G	Q	R	G	I	K	Y	E	Q	E	L	V	F	G	H	G	D	L	T	S	A	F	F	T	V	D	L	L	E	N	G	F	P	N	G	G	P	K	Y	T	G	P	R	H	F	D	Y	K	P	S	R	.	.	T
Template Known Secondary structure		T	T	T													T	T		B							.	B			S	S	S	S				B		T	T	S	S																	T	T							S										T	.	.	T
Template Predicted Secondary structure																											.																																																				.	.
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.			.
		348	.	350	.	.	.	.	.	.	.	.	.								360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.		.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.																																		.
Query SS confidence														.	.	.	.	.	.	.																																		.
Query Sequence		D	K	Y	D	L	F	Y	G	H	I	G	A	.	.	.	.	.	.	.	M	D	T	M	A	L	A	L	K	I	A	A	R	M	I	E	D	G	E	L	D	K	R	I	A	Q	R	Y	S	G	W	N	S	.	E	L	G	Q	Q	I	L	K	G	Q	M	S	L	A	D	L	A	K	Y	A	Q	E	H	H	L	S	P
Query Conservation														.	.	.	.	.	.	.																																		.
Alig confidence														.	.	.	.	.	.	.																																		.																									.
Template Conservation																																																																															.
Template Sequence		D	G	Y	D	G	V	W	D	S	A	K	A	N	M	S	M	Y	L	L	L	K	E	R	A	L	A	F	R	A	D	P	E	V	Q	E	A	M	K	T	S	G	V	F	E	L	G	E	T	T	L	N	A	G	E	S	A	A	D	L	M	N	D	S	A	S	F	A	G	F	D	A	E	A	A	A	E	R	.	N	F
Template Known Secondary structure		S																																								T	T	T	G	G	G	S		S	S		T	T								T		G	G	G	T	T	T							T	T		.
Template Predicted Secondary structure																																																																															.
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.		.	.
		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	H	Q	S	G	R	Q	E	Q	L	E	N	L	V	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	F	I	R	L	N	Q	L	A	I	E	H	L	L	G
Template Known Secondary structure															T	T
Template Predicted Secondary structure
Template SS confidence
		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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