Job Description P00944 Confidence 100.00% Date Thu Jan 5 10:57:16 GMT 2012 Rank 8 Aligned Residues 374 % Identity 26% Template d1qt1a_ SCOP info TIM beta/alpha-barrel Xylose isomerase-like Xylose isomerase Resolution 1.85

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	M	E	E	H	L	R	F	A	A	C	Y	W	H	T	F	C	W	N	G	A	D	M	F	G	V	G	A	F	N	R	P	W	Q	Q	P	G	E	A	L	A	L	A	K	R	K	A	D	V	A	F	E	F	F	H	K	L	H	V	P	F	Y	C	F	H	D	V	D	V	S	P	E	G	A	S	L	K	E	Y
Query Conservation
Alig confidence								.								.															.	.													.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.								.															.	.													.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	P	T	P	E	D	.	K	F	T	F	G	L	W	.	T	V	G	W	Q	G	R	D	P	F	G	D	A	T	.	.	R	G	A	L	D	P	A	E	S	V	R	R	.	.	.	.	.	.	.	.	.	.	.	L	A	E	L	G	A	H	G	V	T	F	H	D	D	D	L	I	P	F	G	A	T	D	S	E	R
Template Known Secondary structure					G	G	G	.								.			T					B	T	T	B			S	.	.	S												.	.	.	.	.	.	.	.	.	.	.					T												S		T	T
Template Predicted Secondary structure								.								.															.	.													.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.		.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.	.	40	.												.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	N	F	A	Q	M	V	D	V	L	A	G	K	Q	E	E	S	G	V	K	L	L	W	G	T	A	N	C	F	T	N	P	R	Y	G	A	G	A	A	T	N	P	D	P	E	V	F	S	W	A	A	T	Q	V	V	T	A	M	E	A	T	H	K	L	G	G	E	N	Y	V	L	W	G	G	R	E	G	Y	E
Query Conservation
Alig confidence														.	.	.	.
Template Conservation														.	.	.	.
Template Sequence		A	E	H	I	K	R	F	R	Q	G	L	D	.	.	.	.	E	T	G	M	K	V	P	M	A	T	T	N	L	F	T	H	P	V	F	K	D	G	G	F	T	A	N	D	R	D	V	R	R	Y	A	L	R	K	T	I	R	N	I	D	L	A	V	E	L	G	A	Q	T	Y	V	A	W	G	G	R	E	G	A	E
Template Known Secondary structure														.	.	.	.			T											S	S	S	G	G	G	T	T		S	T	T		S	S																						T		S							T	T	S			S
Template Predicted Secondary structure														.	.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.					80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	L	N	T	D	L	R	Q	E	R	E	Q	L	G	R	F	M	Q	M	V	V	E	H	K	H	K	I	G	F	Q	G	T	L	L	I	E	P	K	P	Q	E	P	T	K	H	Q	Y	D	Y	D	A	A	T	V	Y	G	F	L	K	Q	F	G	L	E	K	E	I	K	L	N	I	E	A	N	H	A	T	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	G	A	A	K	D	V	R	V	A	L	D	R	M	K	E	A	F	D	L	L	G	E	Y	V	T	S	Q	G	Y	D	T	P	F	A	I	E	P	K	P	N	E	P	R	G	D	I	L	L	P	T	I	G	H	A	L	A	F	I	D	G	L	E	R	P	E	L	Y	G	V	N	P	E	V	G	H	E	Q	M	A
Template Known Secondary structure		S	S	S	S																									T											S	S	S	S	S	S			S	S		S									T	T	S	S	S	G	G	G						B						T	T
Template Predicted Secondary structure
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		G	H	S	F	H	H	E	I	A	T	A	I	A	L	G	L	F	G	S	V	D	A	N	R	G	D	A	Q	L	G	W	D	T	D	.	Q	F	P	N	S	V	E	E	N	A	L	V	M	Y	E	I	L	K	A	G	G	F	T	T	G	G	L	N	F	D	A	K	V	R	R	Q	S	T	D	K	Y	D	L	F	Y
Query Conservation																																				.
Alig confidence																									.											.																								.												.
Template Conservation																									.																																			.												.
Template Sequence		G	L	N	F	P	H	G	I	A	Q	A	L	W	A	G	K	L	F	H	I	D	L	N	.	G	Q	S	G	I	K	Y	D	Q	D	L	R	F	G	P	G	D	L	R	A	A	F	W	L	V	D	L	L	E	S	A	G	Y	E	.	G	P	R	H	F	D	F	K	P	P	R	.	T	E	D	F	D	G	V	W	A
Template Known Secondary structure		T													T	T		B							.	B			S	S	S	S				B		S	S	S	S	S															T			.	S										T	.	T
Template Predicted Secondary structure																									.																																			.												.
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280		.	.	.	.	.	.	.	.	.	290	.		.	.	.	.	.	.	.	.	300
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.			390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
Predicted Secondary structure																																					.	.
Query SS confidence																																					.	.
Query Sequence		G	H	I	G	A	M	D	T	M	A	L	A	L	K	I	A	A	R	M	I	E	D	G	E	L	D	K	R	I	A	Q	R	Y	S	G	.	.	W	N	S	E	L	G	Q	Q	I	L	K	G	Q	M	S	L	A	D	L	A	K	Y	A	Q	E	H	H	L	S	P	V	H	Q	S	G	R	Q	E	Q	L	E	N	L
Query Conservation																																					.	.
Alig confidence																																					.	.										.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.
Template Sequence		S	A	A	G	C	M	R	N	Y	L	I	L	K	E	R	A	A	A	F	R	A	D	P	E	V	Q	E	A	L	R	A	A	R	L	D	E	L	A	Q	P	T	A	G	D	G	L	.	.	.	.	.	.	Q	A	L	L	P	D	R	S	A	F	E	D	F	D	P	D	A	A	A	A	R	G	M	A	F	E	R	L
Template Known Secondary structure																																	T	T						S		T	T	T	T			.	.	.	.	.	.				T	T		G	G	G	T	T	T									S
Template Predicted Secondary structure																																																.	.	.	.	.	.
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.							.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
		433	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	H	Y	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	Q	L	A	M
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		375	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions