Job Description P00944 Confidence 99.82% Date Thu Jan 5 10:57:16 GMT 2012 Rank 16 Aligned Residues 313 % Identity 18% Template d1d8wa_ SCOP info TIM beta/alpha-barrel Xylose isomerase-like L-rhamnose isomerase Resolution 1.60

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.							.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.
Query Sequence		K	R	M	E	E	H	L	R	F	A	A	C	Y	W	H	T	F	C	W	N	G	A	D	M	F	G	V	G	A	F	N	R	P	W	Q	Q	P	G	E	A	L	A	L	A	K	R	K	A	D	V	A	F	E	F	F	H	K	L	H	V	P	F	Y	C	F	H	.	.	.	.	.	.	D	V	D	V	S	P	E	G
Query Conservation																																																																				.	.	.	.	.	.
Alig confidence							.									.	.	.										.	.	.	.	.	.	.	.																																	.	.	.	.	.	.			.
Template Conservation							.									.	.	.										.	.	.	.	.	.	.	.																																									.
Template Sequence		R	Q	L	D	R	.	L	P	V	S	X	H	C	W	.	.	.	Q	G	D	D	V	S	G	F	E	.	.	.	.	.	.	.	.	N	Y	P	G	K	A	R	N	A	S	E	L	R	A	D	L	E	Q	A	X	R	L	I	P	G	P	K	R	L	N	L	H	A	I	Y	L	E	S	D	T	.	P	V	S	R	D
Template Known Secondary structure					T	T	.							G	G	.	.	.	G	G	T	T	T					.	.	.	.	.	.	.	.			S					S														T	S		S								G	G	G				S	S	.				G	G
Template Predicted Secondary structure							.									.	.	.										.	.	.	.	.	.	.	.																																									.
Template SS confidence
		36	.	.	.	40		.	.	.	.	.	.	.	.				.	50	.	.	.	.	.	.	.									.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.		.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.					.	.	.	180	.	.	.	.
Predicted Secondary structure																																														.																								.	.	.	.
Query SS confidence																																														.																								.	.	.	.
Query Sequence		A	S	L	K	E	Y	I	N	N	F	A	Q	M	V	D	V	L	A	G	K	Q	E	E	S	G	V	K	L	L	W	G	T	A	N	C	F	T	N	P	R	Y	G	A	G	.	A	A	T	N	P	D	P	E	V	F	S	W	A	A	T	Q	V	V	T	A	M	E	A	.	.	.	.	T	H	K	L	G	G	E	N
Query Conservation																																														.																								.	.	.	.
Alig confidence								.	.	.										.	.	.	.								.															.																								.	.	.	.
Template Conservation								.	.	.										.	.	.	.								.
Template Sequence		Q	I	K	P	E	H	.	.	.	F	K	N	W	V	E	W	A	K	.	.	.	.	A	N	Q	L	G	L	D	.	F	N	P	S	C	F	S	H	P	L	S	A	D	G	F	T	L	S	H	A	D	D	S	I	R	Q	F	W	I	D	H	C	K	A	S	R	R	V	S	A	Y	F	G	E	Q	L	G	T	P	S
Template Known Secondary structure		G			G	G	G	.	.	.	G									.	.	.	.		T	T					.						S	S	S	G	G	G	T	T	S		S	T	T		S	S																										T	S
Template Predicted Secondary structure								.	.	.										.	.	.	.								.
Template SS confidence
		117	.	.	120	.	.				.	.	.	.	.	.	.	130	.					.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		185		.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230			.	.	.	.	.	.	.	.		.			240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure			.																																														.	.									.		.	.
Query SS confidence			.																																														.	.									.		.	.
Query Sequence		Y	.	V	L	W	G	G	R	E	G	Y	E	T	L	L	N	T	D	L	R	Q	E	R	E	Q	L	G	R	F	M	Q	M	V	V	E	H	K	H	K	I	G	F	Q	G	T	L	L	.	.	I	E	P	K	P	Q	E	P	.	T	.	.	K	H	Q	Y	D	Y	D	A	A	T	V	Y	G	F	L	K	Q	F	G
Query Conservation			.																																														.	.									.		.	.
Alig confidence			.						.															.																			.	.	.				.	.									.		.	.																	.	.	.
Template Conservation									.															.																			.	.	.																																		.	.	.
Template Sequence		V	X	N	I	W	I	P	.	D	G	X	K	D	I	T	V	D	R	L	A	P	R	.	Q	R	L	L	A	A	L	D	E	V	I	S	E	K	L	N	P	A	.	.	.	H	H	I	D	A	V	E	S	K	L	F	G	I	G	A	E	S	Y	T	V	G	S	N	E	F	Y	X	G	Y	A	T	S	R	.	.	.
Template Known Secondary structure									.				S	S			S		S					.											T		S				T	T	.	.	.	T									S		B	T	T	B		S			S	S													.	.	.
Template Predicted Secondary structure									.															.																			.	.	.																																		.	.	.
Template SS confidence
		189	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.				.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.				.	.
Predicted Secondary structure																																																																													.	.	.
Query SS confidence																																																																													.	.	.
Query Sequence		L	E	K	E	I	K	L	N	I	E	A	N	H	A	T	L	A	G	H	S	F	H	H	E	I	A	T	A	I	A	L	G	L	F	G	S	V	D	A	N	R	G	D	A	Q	L	G	W	D	T	D	Q	F	P	N	S	V	E	E	N	A	L	V	M	Y	E	I	L	K	A	G	G	F	T	T	.	.	.	G	G
Query Conservation																																																																													.	.	.
Alig confidence		.	.	.																																.							.	.	.																																.	.	.
Template Conservation		.	.	.																																.							.	.	.
Template Sequence		.	.	.	Q	T	A	L	C	L	D	A	G	H	F	H	P	T	E	V	I	S	D	K	I	S	A	A	X	L	Y	V	P	Q	L	.	L	L	H	V	S	R	.	.	.	P	V	R	W	D	S	D	H	V	V	L	L	D	D	E	T	Q	A	I	A	S	E	I	V	R	H	D	L	F	D	R	V	H	I	G	L
Template Known Secondary structure		.	.	.	T							T	T	S	S		T	T											T	T	T	S	S			.						B	.	.	.		S	S	S	S			B				S	S													T	T	G	G	G	T
Template Predicted Secondary structure		.	.	.																																.							.	.	.
Template SS confidence
					261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.		.	.	.	.	.	.				.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	F	D	A	K	V	R	R	Q	S	T	D	K	Y	D	L	F	Y	G	H	I	G	A	M	D	T	M	A	L	A	L	K	I	A	A	R	M	I	E	D	G	E	L	D	K	R	I	A	Q	R	Y	S
Query Conservation
Alig confidence												.	.	.	.
Template Conservation												.	.	.	.
Template Sequence		D	F	F	D	A	S	I	N	R	I	.	.	.	.	A	A	W	V	I	G	T	R	N	X	K	K	A	L	L	R	A	L	L	E	P	T	A	E	L	R	K	L	E	A	P	G	D	Y	T	A	R	L	A
Template Known Secondary structure							S	S				.	.	.	.																			T	S										T	T	T
Template Predicted Secondary structure												.	.	.	.
Template SS confidence
		334	.	.	.	.	.	340	.	.	.					.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions