Job Description P00944 Confidence 100.00% Date Thu Jan 5 10:57:16 GMT 2012 Rank 10 Aligned Residues 380 % Identity 27% Template d1bxba_ SCOP info TIM beta/alpha-barrel Xylose isomerase-like Xylose isomerase Resolution 2.20

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	M	E	E	H	L	R	F	A	A	C	Y	W	H	T	F	C	W	N	G	A	D	M	F	G	V	G	A	F	N	R	P	W	Q	Q	P	G	E	A	L	A	L	A	K	R	K	A	D	V	A	F	E	F	F	H	K	L	H	V	P	F	Y	C	F	H	D	V	D	V	S	P	E	G	A	S	L	K	E	Y
Query Conservation
Alig confidence								.								.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.								.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	P	K	P	E	H	.	R	F	T	F	G	L	W	.	T	V	G	N	V	G	R	D	P	F	G	D	A	V	R	E	R	L	.	.	.	.	.	.	.	.	.	.	.	.	.	D	P	V	Y	V	V	H	K	L	A	E	L	G	A	Y	G	V	N	L	H	D	E	D	L	I	P	R	G	T	P	P	Q	E	R
Template Known Secondary structure					G	G	G	.								.			T					B	T	T	B				S				.	.	.	.	.	.	.	.	.	.	.	.	.													T		S										S		T	T			T	T
Template Predicted Secondary structure								.								.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.		.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.														.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	N	F	A	Q	M	V	D	V	L	A	G	K	Q	E	E	S	G	V	K	L	L	W	G	T	A	N	C	F	T	N	P	R	Y	G	A	G	A	A	T	N	P	D	P	E	V	F	S	W	A	A	T	Q	V	V	T	A	M	E	A	T	H	K	L	G	G	E	N	Y	V	L	W	G	G	R	E	G	Y	E
Query Conservation
Alig confidence														.	.	.	.
Template Conservation														.	.	.	.
Template Sequence		D	Q	I	V	R	R	F	K	K	A	L	D	.	.	.	.	E	T	G	L	K	V	P	M	V	T	A	N	L	F	S	D	P	A	F	K	D	G	A	F	T	S	P	D	P	W	V	R	A	Y	A	L	R	K	S	L	E	T	M	D	L	G	A	E	L	G	A	E	I	Y	V	V	W	P	G	R	E	G	A	E
Template Known Secondary structure														.	.	.	.			T		B									S	S	S	G	G	G	G	G		S	T	T		S	S																						T									T	T				S
Template Predicted Secondary structure														.	.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.					80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	L	N	T	D	L	R	Q	E	R	E	Q	L	G	R	F	M	Q	M	V	V	E	H	K	H	K	I	G	F	Q	G	T	L	L	I	E	P	K	P	Q	E	P	T	K	H	Q	Y	D	Y	D	A	A	T	V	Y	G	F	L	K	Q	F	G	L	E	K	E	I	K	L	N	I	E	A	N	H	A	T	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	E	A	T	G	K	A	R	K	V	W	D	W	V	R	E	A	L	N	F	M	A	A	Y	A	E	D	Q	G	Y	G	Y	R	F	A	L	E	P	K	P	N	E	P	R	G	D	I	Y	F	A	T	V	G	S	M	L	A	F	I	H	T	L	D	R	P	E	R	F	G	L	N	P	E	F	A	H	E	T	M	A
Template Known Secondary structure			G	G	G		G	G	G	T																				T											S	S	S	S	S	S			S	S		S									T	T	S	S	S	G	G	G						B							T
Template Predicted Secondary structure
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		G	H	S	F	H	H	E	I	A	T	A	I	A	L	G	L	F	G	S	V	D	A	N	R	G	D	A	Q	L	G	W	D	T	D	.	Q	F	P	N	S	V	E	E	N	A	L	V	M	Y	E	I	L	K	A	G	G	F	T	T	G	G	L	N	F	D	A	K	V	R	R	Q	S	T	D	K	Y	D	L	F	Y
Query Conservation																																				.
Alig confidence																										.										.																								.														.
Template Conservation																										.																																		.														.
Template Sequence		G	L	N	F	V	H	A	V	A	Q	A	L	D	A	G	K	L	F	H	I	D	L	N	D	.	Q	R	M	S	R	F	D	Q	D	L	R	F	G	S	E	N	L	K	A	A	F	F	L	V	D	L	L	E	S	S	G	Y	Q	.	G	P	R	H	F	D	A	H	A	L	R	T	E	.	D	E	E	G	V	W	A
Template Known Secondary structure		T													T	T		B							B	.			S	S	S	S				B		T	T	S	S															T	T			.	S										T	T		.
Template Predicted Secondary structure																										.																																		.														.
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.		.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280		.	.	.	.	.	.	.	.	.	290	.	.	.		.	.	.	.	.	.	300
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	H	I	G	A	M	D	T	M	A	L	A	L	K	I	A	A	R	M	I	E	D	G	E	L	D	K	R	I	A	Q	R	Y	S	G	W	N	S	E	L	G	Q	Q	I	L	K	G	Q	M	S	L	A	D	L	A	K	Y	A	Q	E	H	H	L	S	P	V	H	Q	S	G	R	Q	E	Q	L	E	N	L	V	N
Query Conservation
Alig confidence																																																																.
Template Conservation																																																																.
Template Sequence		F	A	R	G	C	M	R	T	Y	L	I	L	K	E	R	A	E	A	F	R	E	D	P	E	V	K	E	L	L	A	A	Y	Y	Q	E	D	P	A	A	L	A	L	L	G	P	Y	S	R	E	K	A	E	A	L	K	R	A	E	L	P	L	E	.	A	K	R	R	R	G	Y	A	L	E	R	L	D	Q	L	A	V
Template Known Secondary structure																						T												T								T	T	S	S	S			S															.
Template Predicted Secondary structure																																																																.
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.		.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
		435	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Y	L	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	Y	L	L
Template Known Secondary structure					T
Template Predicted Secondary structure
Template SS confidence
		380	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions