Job Description P00944 Confidence 99.28% Date Thu Jan 5 10:57:16 GMT 2012 Rank 38 Aligned Residues 228 % Identity 10% Template c3p6lA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:sugar phosphate isomerase/epimerase; PDBTitle: crystal structure of a sugar phosphate isomerase/epimerase (bdi_1903)2 from parabacteroides distasonis atcc 8503 at 1.85 a resolution Resolution 1.85 Å

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		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.						.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.
Query SS confidence																						.	.	.	.	.
Query Sequence		A	D	V	A	F	E	F	F	H	K	L	H	V	P	F	Y	C	F	H	D	.	.	.	.	.	V	D	V	S	P	E	G	A	S	L	K	E	Y	I	N	N	F	A	Q	M	V	D	V	L	A	G	K	Q	E	E	S	G	V	K	L	L	W	G	T	A	N	C	F	T	N	P	R	Y	G	A	G	A	A	T	N
Query Conservation																						.	.	.	.	.
Alig confidence																						.	.	.	.	.															.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	T	E	A	L	D	K	T	Q	E	L	G	L	K	Y	I	E	I	Y	P	G	H	K	L	G	G	K	W	G	D	K	V	F	D	F	N	L	D	A	.	.	.	.	Q	T	Q	K	E	I	K	E	L	A	A	S	K	G	I	K	I	V	G	T	G	V	Y	V	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure												T	T								T	T					G	G	G	T	T				S	T	T				.	.	.	.													T	T											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																									.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.					.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	P	E	V	F	S	W	A	A	T	Q	V	V	T	A	M	E	A	T	H	K	L	G	G	E	N	Y	V	L	W	G	G	R	E	G	Y	E	T	L	L	N	T	D	L	R	Q	E	R	E	Q	L	G	R	F	M	Q	M	V	V	E	H	K	H	K	I	G	F	Q	G	T	L	L	I	E	P	K	P	Q	E
Query Conservation
Alig confidence		.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template Conservation		.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template Sequence		.	.	.	.	.	.	A	E	K	S	S	D	W	E	K	X	F	K	F	A	K	A	X	D	L	E	F	I	T	C	E	P	A	L	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	W	D	L	V	E	K	L	S	K	Q	Y	N	.	.	I	K	I	S	V	H	N	H	P	Q	P
Template Known Secondary structure		.	.	.	.	.	.		S	S	T	T												T	T		S								G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G												T	.	.									S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template SS confidence
								109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.																				.	.	140	.	.	.	.	.	.	.	.	.	150			.	.	.	.	.	.	.	.	.	160	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310					.	.	.
Predicted Secondary structure																																																																											.	.	.	.
Query SS confidence																																																																											.	.	.	.
Query Sequence		P	T	K	H	Q	Y	D	Y	D	A	A	T	V	Y	G	F	L	K	Q	F	G	L	E	K	E	I	K	L	N	I	E	A	N	H	A	T	L	A	G	H	S	F	H	H	E	I	A	T	A	I	A	L	G	L	F	G	S	V	D	A	N	R	G	D	A	Q	L	G	W	D	T	D	Q	.	.	.	.	F	P	N
Query Conservation																																																																											.	.	.	.
Alig confidence			.	.	.	.	.																			.																								.	.																								.	.	.	.
Template Conservation			.	.	.	.	.																			.																								.	.
Template Sequence		S	.	.	.	.	.	D	Y	W	K	P	E	N	L	L	K	A	I	S	G	R	S	Q	S	.	L	G	S	C	S	D	V	G	H	W	R	R	E	G	L	N	Q	I	D	C	L	K	Q	.	.	L	K	G	R	I	I	S	L	H	F	K	D	I	A	P	K	K	A	G	E	N	E	Q	H	D	V	I	W	G	T
Template Known Secondary structure		S	.	.	.	.	.	S	S	S	S									T	T	S		T	T	.													T	T										.	.	T	T	T															T	T		S							T	T	S
Template Predicted Secondary structure			.	.	.	.	.																			.																								.	.
Template SS confidence
		162						.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.			.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	E	E	N	A	L	V	M	Y	E	I	L	K	A	G	G	F	T	T	G	G	L	N	F	D	A	K	V	R	R	Q	S	T	D	K	Y	D	L	F	Y	G	H	I	G	A	M	D	T	M	A	L	A	L	K	I	A	A	R	M	I	E	D	G	E	L	D	K	R	I	A	Q
Query Conservation
Alig confidence						.															.													.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.
Template Conservation						.															.													.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.
Template Sequence		G	I	L	D	.	V	K	G	X	L	K	E	L	K	S	Q	N	F	K	.	G	V	F	S	I	E	Y	E	Y	N	W	E	.	.	.	.	.	.	.	.	.	.	.	.	N	S	V	P	D	I	K	E	C	I	Q	.	.	.	.	.	.	.	.	.	Y	F	N	K	T	A	N	E
Template Known Secondary structure		S	S	S		.											T	T			.									S	S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	S											.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure						.															.													.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.
Template SS confidence
		234	.	.	.		.	.	240	.	.	.	.	.	.	.	.	.	250	.		.	.	.	.	.	.	.	.	260	.	.	.													.	.	.	.	.	.	270	.	.	.	.										.	.	.	.	.	280	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions