Job Description P00944 Confidence 99.77% Date Thu Jan 5 10:57:16 GMT 2012 Rank 20 Aligned Residues 317 % Identity 16% Template c3p14C_ PDB info PDB header:isomerase Chain: C: PDB Molecule:l-rhamnose isomerase; PDBTitle: crystal structure of l-rhamnose isomerase with a novel high thermo-2 stability from bacillus halodurans Resolution 2.51 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.							.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.
Query Sequence		K	R	M	E	E	H	L	R	F	A	A	C	Y	W	H	T	F	C	W	N	G	A	D	M	F	G	V	G	A	F	N	R	P	W	Q	Q	P	G	E	A	L	A	L	A	K	R	K	A	D	V	A	F	E	F	F	H	K	L	H	V	P	F	Y	C	F	H	.	.	.	.	.	.	D	V	D	V	S	P	E	G
Query Conservation																																																																				.	.	.	.	.	.
Alig confidence							.									.	.	.											.	.	.	.	.	.	.																																	.	.	.	.	.	.
Template Conservation							.									.	.	.											.	.	.	.	.	.	.
Template Sequence		E	R	L	K	Q	.	V	P	I	S	I	H	C	W	.	.	.	Q	G	D	D	V	G	G	F	E	L	.	.	.	.	.	.	.	D	Y	P	G	K	A	T	T	P	E	E	L	R	M	D	L	E	K	A	L	S	L	I	P	G	K	H	R	V	N	L	H	A	I	Y	A	E	T	D	G	K	V	V	E	R	D
Template Known Secondary structure					T	T	.							G	G	.	.	.	G	T	T	T	T						.	.	.	.	.	.	.			S					S													T	T	S		S								G	G	G				S	S					G	G
Template Predicted Secondary structure							.									.	.	.											.	.	.	.	.	.	.
Template SS confidence
		26	.	.	.	30		.	.	.	.	.	.	.	.				.	40	.	.	.	.	.	.	.	.								.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.		.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.					.	.	.	180	.	.	.	.
Predicted Secondary structure																																														.																								.	.	.	.
Query SS confidence																																														.																								.	.	.	.
Query Sequence		A	S	L	K	E	Y	I	N	N	F	A	Q	M	V	D	V	L	A	G	K	Q	E	E	S	G	V	K	L	L	W	G	T	A	N	C	F	T	N	P	R	Y	G	A	G	.	A	A	T	N	P	D	P	E	V	F	S	W	A	A	T	Q	V	V	T	A	M	E	A	.	.	.	.	T	H	K	L	G	G	E	N
Query Conservation																																														.																								.	.	.	.
Alig confidence								.	.	.										.	.	.	.								.															.																								.	.	.	.
Template Conservation								.	.	.										.	.	.	.								.
Template Sequence		Q	L	E	P	R	H	.	.	.	F	E	K	W	V	R	W	A	K	.	.	.	.	R	H	G	L	G	L	D	.	F	N	P	T	L	F	S	H	E	K	A	K	D	G	L	T	L	A	H	P	D	Q	A	I	R	Q	F	W	I	D	H	C	I	A	S	R	K	I	G	E	Y	F	G	K	E	L	E	T	P	C
Template Known Secondary structure		G			G	G	G	.	.	.	G									.	.	.	.			T					.						S	S	S	G	G	G	T	T	S		S	T	T		S	S																										T	S
Template Predicted Secondary structure								.	.	.										.	.	.	.								.
Template SS confidence
		108	.	110	.	.	.				.	.	.	.	.	.	120	.	.					.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		185	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.			.	.	220	.	.	.	.	.	.	.	.	.		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure				.																																.	.													.
Query SS confidence				.																																.	.													.
Query Sequence		Y	V	.	L	W	G	G	R	E	G	Y	E	T	L	L	N	T	D	L	R	Q	E	R	E	Q	L	G	R	F	M	Q	M	V	V	.	.	E	H	K	H	K	I	G	F	Q	G	T	L	.	L	I	E	P	K	P	Q	E	P	T	K	H	Q	Y	D	Y	D	A	A	T	V	Y	G	F	L	K	Q	F	G	L	E
Query Conservation				.																																.	.													.
Alig confidence				.					.											.																.	.							.	.	.	.			.																								.	.	.
Template Conservation									.											.																								.	.	.	.																											.	.	.
Template Sequence		L	T	N	I	W	I	P	.	D	G	Y	K	D	T	P	S	D	R	.	L	T	P	R	K	R	L	K	E	S	L	D	Q	I	F	A	A	E	I	N	E	A	Y	.	.	.	.	N	L	D	A	V	E	S	K	L	F	G	I	G	S	E	S	Y	V	V	G	S	H	E	F	Y	L	.	.	.	S	Y	A	L	K
Template Known Secondary structure									.				S	S			S		S	.															T		S				T	T	T	.	.	.	.									S		B	T	T	B		S			S	S							.	.	.
Template Predicted Secondary structure									.											.																								.	.	.	.																											.	.	.
Template SS confidence
		180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.					220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.				.	.	.	.	250
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.				.	.	.	.
Predicted Secondary structure																																																																											.	.	.
Query SS confidence																																																																											.	.	.
Query Sequence		K	E	I	K	L	N	I	E	A	N	H	A	T	L	A	G	H	S	F	H	H	E	I	A	T	A	I	A	L	G	L	F	G	S	V	D	A	N	R	G	D	A	Q	L	G	W	D	T	D	Q	F	P	N	S	V	E	E	N	A	L	V	M	Y	E	I	L	K	A	G	G	F	T	T	.	.	.	G	G	L	N
Query Conservation																																																																											.	.	.
Alig confidence																																		.							.	.	.																																.	.	.
Template Conservation																																		.							.	.	.
Template Sequence		N	D	K	L	C	L	L	D	T	G	H	Y	H	P	T	E	T	V	S	N	K	I	S	A	M	L	L	F	H	D	K	L	.	A	L	H	V	S	R	.	.	.	P	V	R	W	D	S	D	H	V	V	T	F	D	D	E	L	R	E	I	A	L	E	I	V	R	N	D	A	L	D	R	V	L	I	G	L	D	F
Template Known Secondary structure		T	T							T	T	S	S		T	T			S												S			.						B	.	.	.		S	S	S				B				S														T	T		T	T	T
Template Predicted Secondary structure																																		.							.	.	.
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.		.	.	.	.	.	.				.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	D	A	K	V	R	R	Q	S	T	D	K	Y	D	L	F	Y	G	H	I	G	A	M	D	T	M	A	L	A	L	K	I	A	A	R	M	I	E	D	G	E	L	D	K	R	I	A	Q	R	Y	S
Query Conservation
Alig confidence										.	.	.	.
Template Conservation										.	.	.	.
Template Sequence		F	D	A	S	I	N	R	I	.	.	.	.	A	A	W	T	I	G	T	R	N	V	I	K	A	L	L	F	A	M	L	I	P	H	K	Q	L	K	E	W	Q	E	T	G	D	Y	T	R	R	L	A
Template Known Secondary structure				T	T	S				.	.	.	.																			T	S											T	T
Template Predicted Secondary structure										.	.	.	.
Template SS confidence
		327	.	.	330	.	.	.	.					.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions