Job Description P00944 Confidence 99.66% Date Thu Jan 5 10:57:16 GMT 2012 Rank 27 Aligned Residues 233 % Identity 15% Template c3ngfA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:ap endonuclease, family 2; PDBTitle: crystal structure of ap endonuclease, family 2 from brucella2 melitensis Resolution 1.80 Å

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		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	V	A	F	E	F	F	H	K	L	H	V	P	F	Y	C	F	H	D	V	D	V	S	P	E	G	A	S	L	K	E	Y	I	N	N	F	A	Q	M	V	D	V	L	A	G	K	Q	E	E	S	G	V	K	L	L	W	G	T	A	N	C	F	T	N	P	R	Y	G	A	G	A	A	T	N	P	D	P	E	V
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.
Template Sequence		F	L	E	R	F	R	L	A	A	E	A	G	F	G	G	V	E	F	L	F	P	Y	D	F	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	V	I	A	R	E	L	K	Q	H	N	L	T	Q	V	L	F	N	M	P	P	G	D	W	A	A	G	E	R	G	M	A	.	.	A	I	S	G	R
Template Known Secondary structure												T	T		S					S			T	T	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T											S		T	T	T	T			B		T	.	.	T		T	T
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.																.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.			.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	S	W	A	A	T	Q	V	V	T	A	M	E	A	T	H	K	L	G	G	E	N	Y	V	L	W	G	G	R	E	G	Y	E	T	L	L	N	T	D	L	R	Q	E	R	E	Q	L	G	R	F	M	Q	M	V	V	E	H	K	H	K	I	G	F	Q	G	T	L	L	I	E	P	K	P	Q	E	P	T	K	H	Q
Query Conservation
Alig confidence																																			.	.	.	.	.																								.	.
Template Conservation																																			.	.	.	.	.																								.	.
Template Sequence		E	Q	E	F	R	D	N	V	D	I	A	L	H	Y	A	L	A	L	D	C	R	T	L	H	A	M	S	G	I	T	E	G	L	.	.	.	.	.	D	R	K	A	C	E	E	T	F	I	E	N	F	R	Y	A	A	D	K	L	A	P	H	.	.	G	I	T	V	L	V	E	P	L	N	T	R	N	M	P	G	Y
Template Known Secondary structure																			T	T								B		B		T	T	S	.	.	.	.	.																					G	G	G	.	.	T										T	T	T	S	T	T	B
Template Predicted Secondary structure																																			.	.	.	.	.																								.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.						.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.			.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	D	Y	D	A	A	T	V	Y	G	F	L	K	Q	F	G	L	E	K	E	I	K	L	N	I	E	A	N	H	A	T	L	A	G	H	S	F	H	H	E	I	A	T	A	I	A	L	G	L	F	G	S	V	D	A	N	R	G	D	A	Q	L	G	W	D	T	D	Q	F	P	N	S	V	E	E	N	A	L	V	M
Query Conservation
Alig confidence																					.																									.	.												.	.	.	.	.	.
Template Conservation																					.																									.	.												.	.	.	.	.	.
Template Sequence		F	I	V	H	Q	L	E	A	V	G	L	V	K	R	V	N	R	P	N	.	V	A	V	Q	L	D	L	Y	H	A	Q	I	M	D	G	D	L	T	R	L	I	E	K	M	.	.	N	G	A	F	S	H	V	Q	I	A	S	.	.	.	.	.	.	V	P	D	R	H	E	P	D	E	G	E	L	N	Y	P	Y	L
Template Known Secondary structure		S																	T	T	.														T										T	.	.	T	T	S									.	.	.	.	.	.	T	T	T				T	T	S	S	S
Template Predicted Secondary structure																					.																									.	.												.	.	.	.	.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.			.	.	.	.	200	.	.	.	.	.	.							.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	E	I	L	K	A	G	G	F	T	T	G	G	L	N	F	D	A	K	V	R	R	Q	S	T	D	K
Query Conservation
Alig confidence												.
Template Conservation												.
Template Sequence		F	S	V	L	E	S	V	G	Y	R	.	G	W	V	G	C	E	Y	N	P	R	G	K	T	E	S	G
Template Known Secondary structure								T	T			.	S									S	S	S	G	G	G	G
Template Predicted Secondary structure												.
Template SS confidence
		224	.	.	.	.	.	230	.	.	.		.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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