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Job DescriptionP00944
Confidence99.53%DateThu Jan 5 10:57:16 GMT 2012
Rank33Aligned Residues218
% Identity9%Templatec3l23A_
PDB info PDB header:isomeraseChain: A: PDB Molecule:sugar phosphate isomerase/epimerase; PDBTitle: crystal structure of sugar phosphate isomerase/epimerase2 (yp_001303399.1) from parabacteroides distasonis atcc 8503 at 1.70 a3 resolution
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5960.........70.........80.........90.........100.........110.........120.........130........
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Query Sequence  MFGVGAFNRPWQQPGEALALAKRKADVAFEFFHKLHVPFYCFHDVDVSPEGASLKEYINNFAQMVDVLAGKQEESGVKLL
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Template Sequence  EIGLQI. . YSLSQELYKGDV. . . . . AANLRKVKDXGYSKLELAGYGKGAIGGVPXXD. . . . . . . . . . FKKXAEDAGLKII
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G..GGGGGGGGSS
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TTTT..........TT
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Query Sequence  WGTANCFTNPRYGAGA. . ATNPDPEVFSWAATQVVTAMEATHKLGGENYVLWGGREGYETLLNTDLRQEREQLGRFMQMV
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Template Sequence  SSHVNPVDTSISDPFKAXIFKYSKEVTPKIXEYWKATAADHAKLGCKYLIQPXXPTI. . . . . . . TTHDEAKLVCDIFNQA
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B
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   108.110.........120.........130.........140.........150.........160.... .....170.........180
 
   217..220.........230...... ...240.........250.........260.........270.........280........
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Query Sequence  VEHKHKIGFQGTLLIEPKPQ. . . . . . . . EPTKHQYDYDAATVYGFLKQFGLEKEIKLNIEANHATLAGHSFHHEIATAIA
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Template Sequence  SDVIKAEG. . IATGFGYHNHNXEFNRVATKEQQFXKVGDQIYDLXLKDTDPSK. VYFEXDVYWTVXGQNDPVEYXQKH. .
Template Known Secondary structure  TT..
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SGGGS

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   181....... .190.........200.........210.........220.........230. ........240.........250.....
 
   289290.........300.....
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Query Sequence  LGLFGSVDANRGDAQLG
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Template Sequence  PDRIKVLHIKDRAVFGQ
Template Known Secondary structure  TTT

SSSTTS
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   266...270.........280..
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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