 |
Job Description | P00944 | Confidence | 12.87% | Date | Thu Jan 5 10:57:16 GMT 2012 |
Rank | 91 | Aligned Residues | 73 |
% Identity | 16% | Template | c3gndC_ |
PDB info |
PDB header:lyase | Chain: C: PDB Molecule:aldolase lsrf; |
PDBTitle: crystal structure of e. coli lsrf in complex with ribulose-5-phosphate
|
Resolution | 2.90 Å |
|
 |
  |   |
88 | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | F | F | H | K | L | H | V | P | F | Y | C | F | H | D | V | D | V | S | P | E | G | A | S | L | K | E | Y | I | N | N | F | A | Q | M | V | D | V | L | A | G | K | Q | E | E | S | G | V | K | L | L | W | G | T | A | N | C | F | T | N | P | R | Y | G | A | G | A | A | T | N | P | D | P | E | V | F | S | W | A | A |
Query Conservation |   |
|   |
|   |
|
|
|
|   |   |   |   |
|
|
|   |
|   |   |
|   |   |   |
|   |   |
|   |   |   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|
|
|
|
|   |
|   |
|
|
|   |   |
|
|
|   |   |
|
|
|
|
|
|
|   |   |
|
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
Template Conservation |   |
|   |
|
|
|   |
|
|
|
|
|   |
|   | . | . | . |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |
|   |   |   |
|   | . | . | . | . |   |   |
|
|
|
|
|   |
|   |   |   |   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
Template Sequence |   |
D | D | A | V | R | L | N | S | C | A | V | A | A | Q | . |
. |
. |
V | Y | I | G | S | E | Y | E | H | Q | S | I | K | N | I | I | Q | L | V | D | A | G | M | . |
. |
. |
. |
K | V | G | M | P | T | M | A | V | T | G | V | V | R | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Q |
Template Known Secondary structure |   |
 |  |  |  |  | T | T |
| S |  |  |  |  |  | . | . | . |  |
| T | T | S | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  | T |
|
|  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |  | . | . | . |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
128 | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | |
|
|
. | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | |
|
|
|
. | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
180 |
  |
  |   |
168 | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | Q | V | V | T | A | M | E | A | T | H | K | L | G | G | E | N | Y | V | L |
Query Conservation |   |
  |
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |
|
|
|
|
|   |
|
|
|
|
|   |
|
|   |
Template Sequence |   |
R | Y | F | S | L | A | T | R | I | A | A | E | M | G | A | Q | I | I | K | T |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
185 | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|