Job Description P00944 Confidence 99.77% Date Thu Jan 5 10:57:16 GMT 2012 Rank 18 Aligned Residues 280 % Identity 15% Template c2zdsB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:putative dna-binding protein; PDBTitle: crystal structure of sco6571 from streptomyces coelicolor2 a3(2) Resolution 2.30 Å

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		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	W	Q	Q	P	G	E	A	L	A	L	A	K	R	K	A	D	V	A	F	E	F	F	H	K	L	H	V	P	F	Y	C	F	H	D	V	D	V	S	P	E	G	A	S	L	K	E	Y	I	N	N	F	A	Q	M	V	D	V	L	A	G	K	Q	E	E	S	G	V	K	L	L	W	G	T	A	N	C	F	T	N
Query Conservation
Alig confidence																																																			.	.	.	.
Template Conservation																																																			.	.	.	.
Template Sequence		P	R	N	F	T	L	F	T	G	Q	W	A	D	L	P	L	E	E	V	C	R	L	A	R	D	F	G	Y	D	G	L	E	L	A	C	W	G	D	H	F	E	V	D	K	A	L	A	D	P	.	.	.	.	S	Y	V	D	S	R	H	Q	L	L	D	K	Y	G	L	K	C	W	A	I	S	N	H	L	V	G	Q
Template Known Secondary structure										G	G	G	T	T	S													T		S						S	S	T	T	T										T	.	.	.	.	T												T	T		B		S
Template Predicted Secondary structure																																																			.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.					50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		148	.	150	.	.	.	.														.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.							.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.
Query Sequence		P	R	Y	G	A	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	A	T	N	P	D	P	E	V	F	S	W	A	A	T	Q	V	V	T	A	M	E	A	T	H	K	L	G	G	E	N	Y	V	L	W	G	G	R	E	G	Y	E	T	L	.	.	.	.	.	.	L	N	T	D	L	R	Q	E	R	E	Q
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.
Template Conservation
Template Sequence		A	V	C	D	A	I	I	D	E	R	H	E	A	I	L	P	A	R	I	W	G	D	G	D	A	E	G	V	R	Q	R	A	A	A	E	I	K	D	T	A	R	A	A	A	R	L	G	V	D	T	V	I	G	F	T	G	S	A	I	W	H	L	V	A	X	F	P	P	A	P	E	S	X	I	E	R	G	Y	Q	D
Template Known Secondary structure						S	S		S							S						T	T																									T											S	S	G	G	G	T	T			S
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	R	F	M	Q	M	V	V	E	H	K	H	K	I	G	F	Q	G	T	L	L	I	E	P	K	P	Q	E	P	T	K	H	Q	Y	D	Y	D	A	A	T	V	Y	G	F	L	K	Q	F	G	L	E	K	E	I	K	L	N	I	E	A	N	H	A	T	L	A	G	H	S	F	H	H	E	I	A	T	A	I	A
Query Conservation
Alig confidence																		.	.												.	.	.	.	.																																												.	.
Template Conservation																		.	.												.	.	.	.	.																																												.	.
Template Sequence		F	A	D	R	W	N	P	I	L	D	V	F	D	A	E	G	.	.	V	R	F	A	H	E	V	H	P	S	E	.	.	.	.	.	I	A	Y	D	Y	W	T	T	H	R	A	L	E	A	V	G	H	R	P	A	F	G	L	N	F	D	P	S	H	F	V	W	Q	D	L	D	P	V	G	F	L	W	D	.	.	F
Template Known Secondary structure																	T	.	.									T	T	S	.	.	.	.	.	S			S											T	T	T		T	T							T							T										.	.	T
Template Predicted Secondary structure																		.	.												.	.	.	.	.																																												.	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.			.	.	.	.	.	.	.	180	.	.	.						.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.			.
		289	290	.	.	.	.	.	.	.	.	.	300	.																			.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	G	L	F	G	S	V	D	A	N	R	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	Q	L	G	W	D	T	D	Q	F	P	N	S	V	E	E	N	A	L	V	M	Y	E	I	L	K	A	G	G	F	T	T	G	G	L	N	F	D	A	K	V	R	R	Q	S	T	D	K	Y
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.										.													.	.	.	.	.
Template Conservation																																																						.										.													.	.	.	.	.
Template Sequence		R	D	R	I	Y	H	V	D	C	K	E	A	R	K	R	L	D	G	R	N	G	R	L	G	S	H	L	P	W	G	D	P	R	R	G	W	D	F	V	S	A	G	H	G	D	V	P	W	E	D	V	F	.	R	X	L	R	S	I	D	Y	Q	.	G	P	V	S	V	E	W	E	D	A	G	X	.	.	.	.	.
Template Known Secondary structure		G	G	G															S	S	S	B	T	T		T	T			T	T		T	T	B	S						T	T	S	S									.						T	T			.	S									T	T	S	.	.	.	.	.
Template Predicted Secondary structure																																																						.										.													.	.	.	.	.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.		280	.	.	.	.	.	.	.	.		.	290	.	.	.	.	.	.	.	.	.	300
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	F	Y	G	H	I	G	A	M	D	T	M	A	L	A	L	K	I	A	A	R	M	I
Query Conservation
Alig confidence		.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	D	R	L	Q	G	A	P	E	A	L	T	R	L	K	A	F	D
Template Known Secondary structure		.	.	.	.	.	.	.															T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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