Job Description P00944 Confidence 99.68% Date Thu Jan 5 10:57:16 GMT 2012 Rank 24 Aligned Residues 226 % Identity 12% Template c2x7vA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:probable endonuclease 4; PDBTitle: crystal structure of thermotoga maritima endonuclease iv in2 the presence of zinc Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	V	A	F	E	F	F	H	K	L	H	V	P	F	Y	C	F	H	D	V	D	V	S	P	E	G	A	S	L	K	E	Y	I	N	N	F	A	Q	M	V	D	V	L	A	G	K	Q	E	E	S	G	V	K	L	L	W	G	T	A	N	C	F	T	N	P	R	Y	G	A	G	A	A	T	N	P	D	P	E	V
Query Conservation
Alig confidence																								.	.											.	.	.																									.	.	.							.	.
Template Conservation																								.	.											.	.	.																									.	.	.							.	.
Template Sequence		F	D	R	V	P	Q	D	T	V	N	I	G	G	N	S	F	Q	I	F	P	H	N	.	.	A	R	S	W	S	A	K	L	P	S	.	.	.	D	E	A	A	T	K	F	K	R	E	M	K	K	H	G	I	D	W	E	N	A	F	C	H	.	.	.	S	G	Y	L	I	N	.	.	L	A	S	P	K	D	D	I
Template Known Secondary structure		G	G	G								T	T		S						S			.	.		S	S	S							.	.	.															T			G	G	G					.	.	.			T	T			.	.	T	T		S	S
Template Predicted Secondary structure																								.	.											.	.	.																									.	.	.							.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.			.	.	.	.	40	.	.	.	.	.				.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.				70	.	.	.	.	.			.	.	.	.	80	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	S	W	A	A	T	Q	V	V	T	A	M	E	A	T	H	K	L	G	G	E	N	Y	V	L	W	G	G	R	E	G	Y	E	T	L	L	N	T	D	L	R	Q	E	R	E	Q	L	G	R	F	M	Q	M	V	V	E	H	K	H	K	I	G	F	Q	G	T	L	L	I	E	P	K	P	Q	E	P	T	K	H	Q
Query Conservation
Alig confidence																														.	.	.	.	.																													.	.	.	.													.	.
Template Conservation																														.	.	.	.	.																													.	.	.	.													.	.
Template Sequence		W	Q	K	S	V	E	L	L	K	K	E	V	E	I	C	R	K	L	G	I	R	Y	L	N	I	H	P	G	.	.	.	.	.	S	H	L	G	T	G	E	E	E	G	I	D	R	I	V	R	G	L	N	E	V	L	N	N	T	E	G	V	.	.	.	.	V	I	L	L	E	N	V	S	Q	K	G	G	.	.	N
Template Known Secondary structure																				T										.	.	.	.	.			T	T	S																		T	T			S		.	.	.	.											T	T	.	.
Template Predicted Secondary structure																														.	.	.	.	.																													.	.	.	.													.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.						.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.					140	.	.	.	.	.	.	.	.	.	150	.			.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.										290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.																						.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.																						.	.	.
Query Sequence		Y	D	Y	D	A	A	T	V	Y	G	F	L	K	Q	F	G	L	E	K	E	I	K	L	N	I	E	A	N	H	A	T	L	A	G	H	S	F	H	H	E	I	A	T	A	I	A	L	.	.	.	.	.	.	.	.	.	G	L	F	G	S	V	D	A	N	R	G	D	A	Q	L	G	W	D	T	D	Q	.	.	.
Query Conservation																																																	.	.	.	.	.	.	.	.	.																						.	.	.
Alig confidence																																																	.	.	.	.	.	.	.	.	.																						.	.	.
Template Conservation
Template Sequence		I	G	Y	K	L	E	Q	L	K	K	I	R	D	L	V	D	Q	R	D	R	V	A	I	T	Y	D	T	C	H	G	F	D	S	G	Y	D	I	T	K	K	E	G	V	E	A	L	L	N	E	I	E	S	L	F	G	L	E	R	L	K	M	I	H	L	N	D	S	K	Y	P	L	G	A	A	K	D	R	H	E	R
Template Known Secondary structure				S	S												S		G	G	G													T	T			T	T	S															T		G	G	G										S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	P	N	S	V	E	E	N	A	L	V	M	Y	E	I	L	K	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	G	S	G	F	I	G	E	E	G	F	A	V	F	F	S	F	K	E
Template Known Secondary structure		T	T	S	S	S	S										T
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions