Return to main results Retrieve Phyre Job Id

Job DescriptionP00944
Confidence19.02%DateThu Jan 5 10:57:16 GMT 2012
Rank80Aligned Residues72
% Identity24%Templatec1j0yD_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:beta-amylase; PDBTitle: beta-amylase from bacillus cereus var. mycoides in complex2 with glucose
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   151........160...... ...170.........180...... ...190.........200.........210.......
Predicted Secondary structure 








..........


...










Query SS confidence 















. . . . . . . . . .



















. . .






























Query Sequence  GAGAATNPDPEVFSWA. . . . . . . . . . ATQVVTAMEATHKLGGENYV. . . LWGGREGYETLLNTDLRQEREQLGRFMQMVV
Query Conservation    






  


 
..........  








 





 
...








   
 
   
 
 

 
   
 
Alig confidence 















..........



















...






.






....











Template Conservation         
   
 

 


  

  
 
    


 

 



 
 


 

 


.  

 

....

 

 




 
Template Sequence  VNGKGMNPDYKAYLMAPLKKIPEVTNWETFENDLRWAKQNGFYAITVDFWWGDMEK. NGDQQFD. . . . FSYAQRFAQSVK
Template Known Secondary structure  GGG



TT


SS
S
TTT
.SSTT


....
Template Predicted Secondary structure 

























.






....
Template SS confidence 















































































   2.......10.........20.........30.........40.........50....... ..60.... .....70......
 
   218.220.........230.
Predicted Secondary structure 




Query SS confidence 













Query Sequence  EHKHKIGFQGTLLI
Query Conservation 

  


    


Alig confidence 





....



Template Conservation   




....



Template Sequence  NAGMKM. . . . IPII
Template Known Secondary structure  TT
....
Template Predicted Secondary structure 


....
Template SS confidence 













   77..80.. ....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions